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* '''Description:''' general stress protein, controls processing of pro-[[SigK]] by [[SpoIVFB]] <br/><br/>
{{#bank: BofC}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''bofC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || forespore regulator of the sigma-K checkpoint
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || control of processing of pro-[[SigK]] by [[SpoIVFB]]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27750 bofC]
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/BofC BofC]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 19 kDa, 5.753 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 510 bp, 170 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ruvA]]'', ''[[csbX]]''
|-
|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU27750 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU27750 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU27750 DNA_with_flanks]
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:bofC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bofC_2836909_2837421_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:bofC_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU27750]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[sigma factors and their control]]}},
{{SubtiWiki category|[[sporulation proteins]]}},
{{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[SigB regulon]]}},
{{SubtiWiki regulon|[[SigF regulon]]}},
{{SubtiWiki regulon|[[SigG regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU27750
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/csbX-bofC.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11917]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[BofC]]-[[SpoIVB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/10931291 PubMed]
* '''[[Localization]]:'''
=== Database entries ===
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2BW2 2BW2]
* '''UniProt:''' [http://www.uniprot.org/uniprot/O05391 O05391]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU27750]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[csbX]]-[[bofC]]'' {{PubMed|9099855}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=bofC_2836909_2837421_-1 bofC] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigF]] {{PubMed|15699190,9099855}}, [[SigG]] {{PubMed|9099855}}, [[SigB]] {{PubMed|11544224,9099855}}
* '''Regulation:'''
** expressed during sporulation in the forespore ([[SigF]], [[SigG]]) {{PubMed|16497325,9099855}}
** induced by stress ([[SigB]]) {{PubMed|11544224,9099855}}
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>,16497325,10931291,16049010,9025289,11544224,9099855 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:23, 2 April 2014