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AcuC: Difference between revisions

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* '''Description:''' protein deacetylase for the control of [[AcsA]] activity <br/><br/>
{{#bank: AcuC}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''acuC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || [[AcsA]] deacetylase
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|style="background:#ABCDEF;" align="center"|'''Function''' || control of [[AcsA]] activity
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU29710 acuC]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 42 kDa, 5.062 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1161 bp, 387 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[acuB]]'', ''[[motS]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14949&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:acuC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=acuC_3041392_3042555_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:acuC_expression.png|500px]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[utilization of specific carbon sources]]}},
{{SubtiWiki category|[[utilization of lipids]]}},
{{SubtiWiki category|[[protein modification]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[CcpA regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU29710
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/acuABC.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10367]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' deacetylates (and thereby activates) [[AcsA]] (together with [[SrtN]])  [http://www.ncbi.nlm.nih.gov/sites/entrez/19136592 PubMed]
* '''Protein family:''' histone deacetylase family (according to Swiss-Prot) class I histone deacetylase
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:'''
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P39067 P39067]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU29710]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[acuA]]-[[acuB]]-[[acuC]]'' {{PubMed|7934817}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=acuC_3041392_3042555_1 acuC] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|7913927}}
* '''Regulation:'''
** repressed by glucose ([[CcpA]]) {{PubMed|7913927,12850135}}
* '''Regulatory mechanism:'''
** [[CcpA]]: transcription repression {{PubMed|7913927}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
** GP1209 (''[[acuC]]''::''kan''), available in [[Stülke]] lab
** GP1213 (''[[srtN]]''::''cat'')(''[[acuC]]''::''kan''), available in [[Stülke]] lab
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>7913927,,16855235,7934817, 19136592, 18487328 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:31, 2 April 2014