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* '''Description:''' phosphotransferase, attaches teichoic acid, teichuronic acid, or acidic capsular polysaccharide to cell wall peptidoglycan via phosphodiester linkage to N-acteylmuramic acid <br/><br/>
{{#bank: TagU}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''tagU''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' lytR''
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no
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|style="background:#ABCDEF;" align="center"| '''Product''' || phosphotransferase, responsible for attachment of anionic polymers to peptidoglycan
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|style="background:#ABCDEF;" align="center"|'''Function''' || transfer of anionic cell wall polymers from lipid-linked precursors to peptidoglycan
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/TagU TagU]
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 34 kDa, 9.527 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 918 bp, 306 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[lytA]]'', ''[[mnaA]]''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB15582&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:lytR_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lytR_3663281_3664201_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:tagU_expression.png|500px]]
|-
|}
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= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[cell wall synthesis]]}},
{{SubtiWiki category|[[cell envelope stress proteins (controlled by SigM, V, W, X, Y)]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[SigM regulon]]}},
{{SubtiWiki regulon|[[SigX regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU35650
===Phenotypes of a mutant ===
* a ''[[tagU]]'' mutant has no phenoype, the triple ''[[tagT]] [[tagU]] [[tagV]]'' mutant is unable to grow under normal conditions {{PubMed|21964069}}
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/lytR.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10404]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' LytR-Cps2a-Psr family  {{PubMed|19099556}}
* '''Paralogous protein(s):''' [[TagT]], [[TagV]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):''' Mg(2+) {{PubMed|21964069}}
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[MreB]]-[[TagU]] {{PubMed|21964069}}
* '''[[Localization]]:'''
** cytoplasmic membrane (with extracytoplasmic catalaytic domain) {{PubMed|21964069}}
=== Database entries ===
* '''Structure:''' [http://www.pdb.org/pdb/explore/explore.do?structureId=3MEJ 3MEJ] ([[TagT]], 36% identity, 69% similarity)
* '''UniProt:''' [http://www.uniprot.org/uniprot/Q02115 Q02115]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU35650]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''tagU'' {{PubMed|1357079}}
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=lytR_3663281_3664201_1 tagU] {{PubMed|22383849}}
* '''Sigma factor:''' [[SigA]] {{PubMed|1357079,9636707}}, [[SigM]] {{PubMed|19047346}}, [[SigX]] {{PubMed|1357079,9636707}}
* '''Regulation:'''
* '''Regulatory mechanism:'''
** [[LytR]]: autorepression {{PubMed|1357079}}
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>9636707,1357079 , 19099556 21964069 </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 11:45, 19 June 2014