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GreA: Difference between revisions

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* '''Description:''' transcription elongation factor, resolves stalled [[RNA polymerase]] at promoter or promoter-proximal regions, <br/><br/>
{{#bank: GreA}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''greA''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transcription elongation factor
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || transcription elongation
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 4.475 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 471 bp, 157 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[pbpI]]'', ''[[udk]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14674&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:greA_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}
__TOC__
<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[transcription]]}}
= This gene is a member of the following [[regulons]] =
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU27320
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=greA_2791494_2791967_-1 Expression]
===Phenotypes of a mutant ===
* [[RNA polymerase]] accumulates in promoter-proximal regions of many genes {{PubMed|21515770}}
=== Database entries ===
* '''DBTBS entry:''' no entry
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG19019]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:''' greA/greB family (according to Swiss-Prot)
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[GreA]]-[[RNA polymerase]] {{PubMed|21515770}}
* '''[[Localization]]:''' uniformly distributed throughout the nucleoid {{PubMed|16707701,21515770}}
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/P80240 P80240]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU27320]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:'''
* '''[[Sigma factor]]:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
==Reviews==
<pubmed> 16815708 15720542 15294154 </pubmed>
==Original  Publications==
<pubmed>16707701  21266474 21515770</pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 09:24, 14 October 2014