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CotV: Difference between revisions

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* '''Description:''' spore coat protein (insoluble fraction), formation of the spore crust <br/><br/>
{{#bank: CotV}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''cotV''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || spore coat protein (insoluble fraction)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || resistance of the spore
|-
|colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/CotV CotV]
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 4.01 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 384 bp, 128 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[cotW]]'', ''[[yjcA]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13035&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:cotV_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}
__TOC__
<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[sporulation proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[GerE regulon]]}},
{{SubtiWiki regulon|[[SigK regulon]]}}
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU11780
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotV_1251631_1252017_-1 Expression]
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/cotVWX.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10496]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
** [[CotV]]-[[CotW]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19304857 PubMed]
* '''[[Localization]]:'''
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/Q08309 Q08309]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU11780]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[cotV]]-[[cotW]]-[[cotX]]'' [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed]
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190,7519271}}
* '''Regulation:''' repressed by casamino acids [http://www.ncbi.nlm.nih.gov/pubmed/12107147 PubMed] 
* '''Regulatory mechanism:''' [[GerE]]: transcription activation [http://www.ncbi.nlm.nih.gov/pubmed/7519271 PubMed],
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>7519271,19304857, 21665972,12107147, </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 16:56, 17 April 2015