Jump to content

NcRNA: Difference between revisions

From SubtiWiki
← Older edit
No edit summary
 
(19 intermediate revisions by the same user not shown)
Line 14: Line 14:
* 6.10. [[Pseudogenes]]
* 6.10. [[Pseudogenes]]
|Related=
|Related=
none
* [[RNA switch]]
* [[RNase]]
|}}
|}}


Line 23: Line 24:
* ''[[bsrA]]''
* ''[[bsrA]]''
* ''[[bsrB]]''
* ''[[bsrB]]''
=Back to [[categories]]=
 
'''tmRNA'''
'''tmRNA'''


Line 39: Line 40:


* ''[[fsrA]]''
* ''[[fsrA]]''
* ''[[roxS]]''
* ''[[rrcM]]''
* [[sr1]]
* [[SR4]]
* [[RnaC]]
'''antisense RNAs of toxin/antitoxin systems'''
* ''[[ratA]]''
* ''[[ratA]]''
* [[sr1]]
* ''[[as-bsrH]]''
* ''[[as-yonT]]''
* ''[[SR5]]''


'''small RNAs with unknown functions'''
'''small RNAs with unknown functions'''
Line 46: Line 56:
* ''[[bsrC]]''
* ''[[bsrC]]''
* ''[[bsrD]]''
* ''[[bsrD]]''
* ''[[bsrE]]''
* ''[[bsrF]]''
* ''[[bsrF]]''
* ''[[bsrG]]''
* ''[[bsrH]]''
* ''[[bsrH]]''
* ''[[bsrI]]''
* ''[[bsrI]]''
* ''[[rsmY]]''
* ''[[csfG]]''
* ''[[surA]]''
* ''[[surA]]'' (for ''[[yndL]]'')
* ''[[surC]]''
* ''[[surC]]''
'''Antisense RNAs were predicted for the following genes:''' {{PubMed|20525796}}
* ''[[bglP]]''
* ''[[comER]]''
* ''[[ggaA]]''
* ''[[jag]]''
* ''[[leuA]]''
* ''[[mbl]]''
* ''[[mtlD]]''
* ''[[mutS]]''
* ''[[nadB]]''
* ''[[ndoA]]''
* ''[[opuBD]]''
* ''[[sda]]''
* ''[[sigA]]''
* ''[[wprA]]''
* ''[[yddR]]''
* ''[[ydiF]]''
* ''[[yfhD]]''
* ''[[yndL]]'' (''[[surA]]'')
* ''[[yoeA]]''
* ''[[yoqZ]]''
* ''[[yqzJ]]''
* ''[[ytoA]]''
* ''[[ytoI]]''
* ''[[ywfM]]''
* ''[[ywqA]]''
* ''[[yyaQ]]''
'''Additional noncoding RNAs were predicted for the following intergenic regions:''' {{PubMed|20525796}}
* ''[[yqaJ]]''-''[[yqaI]]''
* ''[[yqaO]]''-''[[yqaN]]''
* ''[[yndN]]''-''[[lexA]]''
* ''[[ydcO]]''-''[[ydcP]]''
* ''[[yolA]]''-''[[yokL]]''
* ''[[yokC]]''-''[[yokB]]''
* ''[[pbpG]]''-''[[ywhD]]''
* ''[[stoA]]''-''[[zosA]]''
* ''[[yobI]]''-''[[yobJ]]''
* ''[[vmlR]]''-''[[ydgF]]''
* ''[[yrzI]]''-''[[yrhG]]''
* ''[[yfmI]]''-''[[yfmG]]''
* ''[[hxlR]]''-''[[srfAA]]''
* ''[[mutL]]''-''[[ymzD]]''
* ''[[mntA]]''-''[[menC]]''
* ''[[yopM]]''-''[[yopL]]''
* ''[[yizD]]''-''[[yjbH]]''
* ''[[pps]]''-''[[xynA]]''
* ''[[yqdB]]''-''[[yqbM]]''
* ''[[yugI]]''-''[[alaT]]''
* ''[[trxA]]''-''[[xsa]]''
* ''[[ykwD]]''-''[[pbpH]]''
* ''[[ymzA]]''-''[[nrdI]]''
* ''[[yvcI]]''-''[[trxB]]''
* ''[[glmM]]''-''[[glmS]]''
* ''[[yhaZ]]''-''[[yhaX]]''
* ''[[yneK]]''-''[[cotM]]''
* ''[[trpS]]''-''[[oppA]]''
* ''[[gerPA]]''-''[[yisI]]''


==Reviews==
==Reviews==
<pubmed> 19239884 19207102 20525796 19859665</pubmed>
<pubmed> 19239884 19207102 20525796 19859665 21646430 22827307 24576839 25808661 27784798</pubmed>
 
==Important original publications==
<pubmed>22383849</pubmed>
=Back to [[categories]]=

Latest revision as of 15:40, 28 October 2016

Parent category
Neighbouring categories
Related categories




6S RNA

tmRNA

small cytoplasmatic RNA (protein secretion)

RNA component of RNase P

regulatory RNAs

antisense RNAs of toxin/antitoxin systems

small RNAs with unknown functions

Antisense RNAs were predicted for the following genes: PubMed

Additional noncoding RNAs were predicted for the following intergenic regions: PubMed

Reviews

<pubmed> 19239884 19207102 20525796 19859665 21646430 22827307 24576839 25808661 27784798</pubmed>

Important original publications

<pubmed>22383849</pubmed>

Back to categories

Retrieved from "https://subtiwiki.uni-goettingen.de/wiki/index.php?title=NcRNA&oldid=209417"