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SacT: Difference between revisions

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* '''Description:''' write here <br/><br/>
{{#bank: SacT}}


{| align="right" border="1" cellpadding="2"
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''sacT''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ipa-47d ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' ||
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional antiterminator
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|style="background:#ABCDEF;" align="center"|'''Function''' || positive regulation of sacA and sacP
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 31 kDa, 5.587 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 828 bp, 276 aa
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/sacT_nucleotide.txt    Gene sequence      (+200bp)  ]'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/sacT_protein.txt Protein sequence]'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:sacT_context.gif]]
|-
|}
__TOC__
<br/><br/>
=The gene=
=== Basic information ===
* '''Coordinates:'''
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/sacT.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10593]
=== Additional information===
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:''' binding to the mRNA of the ''[[sacP]]-[[sacA]]'' operon, causes transcription antitermination (in presence of sucrose and absence of glucose)
* '''Protein family:''' BglG family of antiterminators
* '''Paralogous protein(s):''' [[LicT]], [[SacY]], [[GlcT]]
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''Interactions:'''
* '''Localization:'''
=== Database entries ===
* '''Structure:'''
* '''Swiss prot entry:'''
* '''KEGG entry:'''
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:'''
* '''Sigma factor:'''
* '''Regulation:'''
* '''Regulatory mechanism:'''
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
# Aymerich, S. and Steinmetz, M. (1992) Specificity determinants and structural features in the RNA target of the bacterial antiterminator proteins of the BglG/SacY family. Proc. Natl. Acad. Sci. USA 89, 10410-10414. [http://www.ncbi.nlm.nih.gov/sites/entrez/1279678 PubMed]
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Latest revision as of 10:17, 1 June 2015