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Utilization of specific carbon sources: Difference between revisions

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{{CategoryTree
{{CategoryTree
|Parents=
|Parents=
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* 2.2.2. [[Utilization of specific carbon sources]]
* 2.2.2. [[Utilization of specific carbon sources]]
|Related=
|Related=
none
* [[CcpA regulon]]
|}}
|}}
== Genes in this functional category ==
=== Utilization of organic acids ===
* ''[[acsA]]''
* ''[[acuA]]''
* ''[[acuC]]''
* ''[[cimH]]''
* ''[[citH]]''
* ''[[citM]]''
* ''[[citS]]''
* ''[[citT]]''
* ''[[dctB]]''
* ''[[dctP]]''
* ''[[dctR]]''
* ''[[dctS]]''
* ''[[hbuT]]''
* ''[[lutA]]''
* ''[[lutB]]''
* ''[[lutC]]''
* ''[[lutP]]''
* ''[[lutR]]''
*'' [[lytS]]''
* ''[[lytT]]''
* ''[[maeA]]''
* ''[[maeN]]''
* ''[[malK]]''
* ''[[malR]]''
* ''[[malS]]''
* ''[[mleA]]''
* ''[[mleN]]''
* ''[[scoA]]''
* ''[[scoB]]''
* ''[[ybaR]]''
* ''[[yflS]]''
* ''[[yoaB]]''
* ''[[yraO]]''
* ''[[ysbA]]''
* ''[[ytsJ]]''
* ''[[yxjF]]''
=== Utilization of acetoin ===
* ''[[acoA]]''
* ''[[acoB]]''
* ''[[acoC]]''
* ''[[acoL]]''
* ''[[acoR]]''
=== Utilization of glycerol/ glycerol-3-phosphate ===
* ''[[glpD]]''
* ''[[glpF]]''
* ''[[glpK]]''
* ''[[glpP]]''
* ''[[glpQ]]''
* ''[[glpT]]''
=== Utilization of ribose ===
* ''[[rbsA]]''
* ''[[rbsB]]''
* ''[[rbsC]]''
* ''[[rbsD]]''
* ''[[rbsK]]''
* ''[[rbsR]]''
=== Utilization of xylan/ xylose ===
* ''[[araE]]''
* ''[[xylA]]''
* ''[[xylB]]''
* ''[[xylR]]''
* ''[[xynA]]''
* ''[[xynB]]''
* ''[[xynP]]''
=== Utilization of arabinan/ arabinose/ arabitol ===
* ''[[abf2]]''
* ''[[abfA]]''
* ''[[abn2]]''
* ''[[abnA]]''
*'' [[araA]]''
* ''[[araB]]''
* ''[[araD]]''
* ''[[araE]]''
* ''[[araN]]''
* ''[[araP]]''
* ''[[araQ]]''
* ''[[araR]]''
=== Utilization of fructose ===
* ''[[fruA]]''
* ''[[fruK]]''
* ''[[fruR]]''
* ''[[levD]]''
* ''[[levE]]''
* ''[[levF]]''
* ''[[levG]]''
* ''[[levR]]''
=== Utilization of galactose ===
* ''[[araE]]''
* ''[[galE]]''
* ''[[galK]]''
* ''[[galM]]''
* ''[[galT]]''
=== Utilization of mannose ===
* ''[[manA]]''
* ''[[manP]]''
* ''[[manR]]''
* ''[[pmi]]''
=== Utilization of mannitol ===
* ''[[mtlA]]''
* ''[[mtlD]]''
* ''[[mtlF]]''
* ''[[mtlR]]''
=== Utilization of glucitol ===
* ''[[gutB]]''
* ''[[gutP]]''
* ''[[gutR]]''
=== Utilization of gluconate ===
* ''[[gntK]]''
* ''[[gntP]]''
* ''[[gntR]]''
* ''[[gntZ]]''
=== Utilization of glucarate/galactarate ===
* ''[[ycbC]]''
* ''[[ycbD]]''
* ''[[ycbE]]''
* ''[[ycbF]]''
* ''[[ycbG]]''
*'' [[ycbH]]''
=== Utilization of hexuronate  ===
* ''[[exuR]]''
* ''[[exuT]]''
* ''[[kdgA]]''
* ''[[kdgK]]''
* ''[[kdgR]]''
* ''[[kdgT]]''
* ''[[kduD]]''
* ''[[kduI]]''
* ''[[uxaA]]''
* ''[[uxaB]]''
* ''[[uxaC]]''
* ''[[uxuA]]''
* ''[[yjmB]]''
* ''[[yjmC]]''
* ''[[yjmD]]''
* ''[[yjmF]]''
=== Utilization of inositol ===
* ''[[iolA]]''
* ''[[iolB]]''
* ''[[iolC]]''
* ''[[iolD]]''
* ''[[iolE]]''
* ''[[iolF]]''
* ''[[iolG]]''
* ''[[iolH]]''
* ''[[iolI]]''
* ''[[iolJ]]''
* ''[[iolR]]''
* ''[[iolS]]''
* ''[[iolT]]''
* ''[[iolW]]''
* ''[[iolX]]''
* ''[[yfiG]]''
=== Utilization of amino sugars ===
* ''[[frlB]]''
* ''[[frlD]]''
* ''[[frlM]]''
* ''[[frlN]]''
*'' [[frlO]]''
* ''[[frlR]]''
* ''[[gamA]]''
* ''[[gamP]]''
* ''[[gamR]]''
* ''[[murP]]''
* ''[[murQ]]''
* ''[[murR]]''
* ''[[nagA]]''
* ''[[nagB]]''
* ''[[nagP]]''
* ''[[nagR]]''
* ''[[yurJ]]''
=== Utilization of beta-glucosides ===
* ''[[bglA]]''
* ''[[bglH]]''
* ''[[bglP]]''
* ''[[licT]]''
* ''[[yckE]]''
=== Utilization of sucrose ===
* ''[[fruC]]''
* ''[[sacA]]''
* ''[[sacB]]''
* ''[[sacP]]''
* ''[[sacT]]''
* ''[[sacX]]''
* ''[[sacY]]''
=== Utilization of trehalose ===
* ''[[glcK]]''
* ''[[treA]]''
* ''[[treP]]''
* ''[[treR]]''
=== Utilization of melibiose ===
* ''[[amyC]]''
* ''[[amyD]]''
* ''[[melA]]''
* ''[[msmE]]''
* ''[[msmR]]''
* ''[[msmX]]''
=== Utilization of maltose ===
* ''[[glcK]]''
*'' [[glvR]]''
* ''[[malA]]''
* ''[[malP]]''
* ''[[yvdK]]''
=== Utilization of starch/ maltodextrin ===
* ''[[amyE]]''
* ''[[amyX]]''
* ''[[glcK]]''
* ''[[maa]]''
* ''[[malL]]''
* ''[[mdxE]]''
* ''[[mdxF]]''
* ''[[mdxG]]''
* ''[[msmX]]''
* ''[[pgcM]]''
* ''[[yvdE]]''
* ''[[yvdF]]''
=== Utilization of glucomannan ===
* ''[[gmuA]]''
* ''[[gmuB]]''
* ''[[gmuC]]''
* ''[[gmuD]]''
* ''[[gmuE]]''
* ''[[gmuF]]''
* ''[[gmuG]]''
* ''[[gmuR]]''
=== Utilization of rhamnose and pectin ===
* ''[[lplD]]''
* ''[[rhaA]]''
* ''[[rhaB]]''
* ''[[rhaEW]]''
* ''[[rhaM]]''
* ''[[rhaR]]''
* ''[[rhiF]]''
* ''[[rhiG]]''
* ''[[rhiL]]''
* ''[[rhiN]]''
* ''[[rhgR]]''
* ''[[ybcM]]''
* ''[[yesT]]''
* ''[[yesV]]''
* ''[[yesW]]''
* ''[[yesX]]''
* ''[[yesY]]''
* ''[[yesZ]]''
* ''[[yteR]]''
=== Utilization of galactan ===
* ''[[cycB]]''
* ''[[ganA]]''
* ''[[ganB]]''
*'' [[ganP]]''
* ''[[ganQ]]''
* ''[[lacR]]''
=== Utilization of other polymeric carbohydrates ===
* ''[[bglC]]''
* ''[[bglS]]''
* ''[[csn]]''
* ''[[levB]]''
* ''[[levD]]''
* ''[[levE]]''
* ''[[levF]]''
* ''[[levG]]''
* ''[[levR]]''
* ''[[licA]]''
* ''[[licB]]''
* ''[[licC]]''
* ''[[licH]]''
* ''[[licR]]''
* ''[[licT]]''
* ''[[pel]]''
* ''[[pelB]]''
* ''[[pelC]]''
* ''[[sacC]]''
* ''[[senS]]''
* ''[[xynC]]''
* ''[[xynD]]''
* ''[[ysdC]]''
* ''[[ytoP]]''
* ''[[yugT]]''
=== Utilization of other pentoses and hexoses===
* ''[[ydaE]]''
== Utilization of specific carbon sources in [http://subtiwiki.uni-goettingen.de/subtipathways.html ''Subti''Pathways]: [http://subtiwiki.uni-goettingen.de/pathways/carbohydrate_metabolic_pathways.html Utilization of different carbon sources]==
==Reviews==
<pubmed> 11018147 19202299 17982469 </pubmed>
=Back to [[categories]]=

Latest revision as of 16:52, 26 September 2016

Parent categories
Neighbouring categories
Related categories

Genes in this functional category

Utilization of organic acids

Utilization of acetoin

Utilization of glycerol/ glycerol-3-phosphate

Utilization of ribose

Utilization of xylan/ xylose

Utilization of arabinan/ arabinose/ arabitol

Utilization of fructose

Utilization of galactose

Utilization of mannose

Utilization of mannitol

Utilization of glucitol

Utilization of gluconate

Utilization of glucarate/galactarate

Utilization of hexuronate

Utilization of inositol

Utilization of amino sugars

Utilization of beta-glucosides

Utilization of sucrose

Utilization of trehalose

Utilization of melibiose

Utilization of maltose

Utilization of starch/ maltodextrin

Utilization of glucomannan

Utilization of rhamnose and pectin

Utilization of galactan

Utilization of other polymeric carbohydrates

Utilization of other pentoses and hexoses

Utilization of specific carbon sources in SubtiPathways: Utilization of different carbon sources

Reviews

<pubmed> 11018147 19202299 17982469 </pubmed>

Back to categories

Retrieved from "https://subtiwiki.uni-goettingen.de/wiki/index.php?title=Utilization_of_specific_carbon_sources&oldid=209380"