CodY regulon: Difference between revisions
| (11 intermediate revisions by the same user not shown) | |||
| Line 16: | Line 16: | ||
=== Repression === | === Repression === | ||
* ''[[acsA]]'' | * ''[[acsA]]'' | ||
* ''[[amhX]]'' | |||
* ''[[ansZ]]'' | * ''[[ansZ]]'' | ||
* ''[[appA/1]]'' | * ''[[appA/1]]'' | ||
| Line 23: | Line 24: | ||
* ''[[appD]]'' | * ''[[appD]]'' | ||
* ''[[appF]]'' | * ''[[appF]]'' | ||
* ''[[aprE]]'' | |||
* ''[[argC]]-[[argJ]]-[[argB]]-[[argD]]-[[carA]]-[[carB]]-[[argF]]'' | |||
* ''[[asnH]]'' | * ''[[asnH]]'' | ||
* ''[[bacA]]'' | * ''[[bacA]]'' | ||
| Line 32: | Line 35: | ||
* ''[[bacG]]'' | * ''[[bacG]]'' | ||
* ''[[bcaP]]'' | * ''[[bcaP]]'' | ||
* ''[[bkdR]]'' | * ''[[bkdR]]'' | ||
* ''[[ | * ''[[braB]]'' | ||
* ''[[citB]]'' | * ''[[citB]]'' | ||
* ''[[clpQ]]'' | * ''[[clpQ]]'' | ||
| Line 61: | Line 60: | ||
* ''[[kapB]]'' | * ''[[kapB]]'' | ||
* ''[[kinB]]'' | * ''[[kinB]]'' | ||
* ''[[ | * ''[[mpr]]'' | ||
* ''[[nprE]]'' | |||
* ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | * ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | ||
* ''[[oppA]]-[[oppB]]-[[oppC]]-[[oppD]]-[[oppF]]'' | |||
* ''[[phrA]]'' | * ''[[phrA]]'' | ||
* ''[[phrC]]'' | * ''[[phrC]]'' | ||
* ''[[phrE]]'' | * ''[[phrE]]'' | ||
* ''[[ptb]]'' | * ''[[ptb]]-[[bcd]]-[[buk]]-[[lpdV]]-[[bkdAA]]-[[bkdAB]]-[[bkdB]]'' | ||
* ''[[putB]]-[[putC]]'' | * ''[[putB]]-[[putC]]'' | ||
* ''[[rapA]]'' | * ''[[rapA]]'' | ||
| Line 73: | Line 74: | ||
* ''[[rocA]]-[[rocB]]-[[rocC]]'' | * ''[[rocA]]-[[rocB]]-[[rocC]]'' | ||
* ''[[rocD]]-[[rocE]]-[[rocF]]'' | * ''[[rocD]]-[[rocE]]-[[rocF]]'' | ||
* ''[[scoC]]'' | |||
* ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]'' | * ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]'' | ||
* ''[[thrD]]'' | |||
* ''[[ureA]]-[[ureB]]-[[ureC]]'' | * ''[[ureA]]-[[ureB]]-[[ureC]]'' | ||
* ''[[vpr]]'' | |||
* ''[[ybgE]]'' | * ''[[ybgE]]'' | ||
* ''[[ycgA]]'' | * ''[[ycgA]]'' | ||
* ''[[yhjC]]'' | * ''[[yhjC]]'' | ||
* ''[[ykfA]]'' | * ''[[ykfA]]'' | ||
| Line 83: | Line 88: | ||
* ''[[ykfD]]'' | * ''[[ykfD]]'' | ||
* ''[[ylmA]]'' | * ''[[ylmA]]'' | ||
* ''[[yoyD]]'' | |||
* ''[[yuiA]]'' | * ''[[yuiA]]'' | ||
* ''[[yuiB]]'' | * ''[[yuiB]]'' | ||
Latest revision as of 17:43, 5 June 2016
| Regulator | |
Genes in this regulon
Activation
Repression
- acsA
- amhX
- ansZ
- appA/1
- appA/2
- appB
- appC
- appD
- appF
- aprE
- argC-argJ-argB-argD-carA-carB-argF
- asnH
- bacA
- bacB
- bacC
- bacD
- bacE
- bacF
- bacG
- bcaP
- bkdR
- braB
- citB
- clpQ
- clpY
- codV
- codY
- comK
- dppA
- dppB
- dppC
- dppD
- dppE
- flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB
- frlB-frlO-frlN-frlM-frlD
- gabP
- hag
- hom-thrC-thrB
- hutP-hutH-hutU-hutI-hutG-hutM
- ilvA-ypmP
- ilvB-ilvH-ilvC-leuA-leuB-leuC-leuD
- ilvD
- ispA
- kapB
- kinB
- mpr
- nprE
- nupN-nupO-nupP-nupQ
- oppA-oppB-oppC-oppD-oppF
- phrA
- phrC
- phrE
- ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB
- putB-putC
- rapA
- rapC
- rapE
- rocA-rocB-rocC
- rocD-rocE-rocF
- scoC
- srfAA-srfAB-comS-srfAC-srfAD
- thrD
- ureA-ureB-ureC
- vpr
- ybgE
- ycgA
Important publications on the CodY regulon
<pubmed>18083814 17982469 15802253 12618455 23569278 24462007 24843172 </pubmed>