CodY regulon: Difference between revisions
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* ''[[metP]]'' | * ''[[metP]]'' | ||
* ''[[metQ]]'' | * ''[[metQ]]'' | ||
* ''[[pksC]]-[[pksD]]-[[pksE]]-[[acpK]]-[[pksF]]-[[pksG]]-[[pksH]]-[[pksI]]-[[pksJ]]-[[pksL]]-[[pksM]]-[[pksN]]-[[pksR]]'' | |||
=== Repression === | === Repression === | ||
* ''[[acsA]]'' | * ''[[acsA]]'' | ||
* ''[[amhX]]'' | |||
* ''[[ansZ]]'' | * ''[[ansZ]]'' | ||
* ''[[appA/1]]'' | * ''[[appA/1]]'' | ||
| Line 22: | Line 24: | ||
* ''[[appD]]'' | * ''[[appD]]'' | ||
* ''[[appF]]'' | * ''[[appF]]'' | ||
* ''[[aprE]]'' | |||
* ''[[argC]]-[[argJ]]-[[argB]]-[[argD]]-[[carA]]-[[carB]]-[[argF]]'' | |||
* ''[[asnH]]'' | * ''[[asnH]]'' | ||
* ''[[bacA]]'' | * ''[[bacA]]'' | ||
| Line 29: | Line 33: | ||
* ''[[bacE]]'' | * ''[[bacE]]'' | ||
* ''[[bacF]]'' | * ''[[bacF]]'' | ||
* ''[[bacG]]'' | |||
* ''[[bcaP]]'' | * ''[[bcaP]]'' | ||
* ''[[bkdR]]'' | * ''[[bkdR]]'' | ||
* ''[[ | * ''[[braB]]'' | ||
* ''[[citB]]'' | * ''[[citB]]'' | ||
* ''[[clpQ]]'' | * ''[[clpQ]]'' | ||
| Line 48: | Line 43: | ||
* ''[[codY]]'' | * ''[[codY]]'' | ||
* ''[[comK]]'' | * ''[[comK]]'' | ||
* ''[[dppA]]'' | * ''[[dppA]]'' | ||
* ''[[dppB]]'' | * ''[[dppB]]'' | ||
| Line 54: | Line 48: | ||
* ''[[dppD]]'' | * ''[[dppD]]'' | ||
* ''[[dppE]]'' | * ''[[dppE]]'' | ||
* ''[[flgB]] | * ''[[flgB]]-[[flgC]]-[[fliE]]-[[fliF]]-[[fliG]]-[[fliH]]-[[fliI]]-[[fliJ]]-[[ylxF]]-[[fliK]]-[[flgD]]-[[flgE]]-[[fliL]]-[[fliM]]-[[fliY]]-[[cheY]]-[[fliZ]]-[[fliP]]-[[fliQ]]-[[fliR]]-[[flhB]]-[[flhA]]-[[flhF]]-[[flhG]]-[[cheB]]-[[cheA]]-[[cheW]]-[[cheC]]-[[cheD]]-[[sigD]]-[[swrB]]'' | ||
* ''[[frlB]]-[[frlO]]-[[frlN]]-[[frlM]]-[[frlD]]'' | * ''[[frlB]]-[[frlO]]-[[frlN]]-[[frlM]]-[[frlD]]'' | ||
* ''[[gabP]]'' | * ''[[gabP]]'' | ||
* ''[[hag]]'' | * ''[[hag]]'' | ||
* ''[[ | * ''[[hom]]-[[thrC]]-[[thrB]]'' | ||
* ''[[hutH]] | * ''[[hutP]]-[[hutH]]-[[hutU]]-[[hutI]]-[[hutG]]-[[hutM]]'' | ||
* ''[[ilvA]]-[[ypmP]]'' | |||
* ''[[ilvB]]-[[ilvH]]-[[ilvC]]-[[leuA]]-[[leuB]]-[[leuC]]-[[leuD]]'' | |||
* ''[[ | |||
* ''[[ | |||
* ''[[ilvD]]'' | * ''[[ilvD]]'' | ||
* ''[[ | * ''[[ispA]]'' | ||
* ''[[kapB]]'' | * ''[[kapB]]'' | ||
* ''[[kinB]]'' | * ''[[kinB]]'' | ||
* ''[[ | * ''[[mpr]]'' | ||
* ''[[ | * ''[[nprE]]'' | ||
* ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | * ''[[nupN]]-[[nupO]]-[[nupP]]-[[nupQ]]'' | ||
* ''[[oppA]]-[[oppB]]-[[oppC]]-[[oppD]]-[[oppF]]'' | |||
* ''[[phrA]]'' | * ''[[phrA]]'' | ||
* ''[[phrC]]'' | * ''[[phrC]]'' | ||
* ''[[phrE]]'' | * ''[[phrE]]'' | ||
* ''[[ptb]]'' | * ''[[ptb]]-[[bcd]]-[[buk]]-[[lpdV]]-[[bkdAA]]-[[bkdAB]]-[[bkdB]]'' | ||
* ''[[putB]]-[[putC]]'' | * ''[[putB]]-[[putC]]'' | ||
* ''[[rapA]]'' | * ''[[rapA]]'' | ||
* ''[[rapC]]'' | * ''[[rapC]]'' | ||
* ''[[rapE]]'' | * ''[[rapE]]'' | ||
* ''[[rocA]] | * ''[[rocA]]-[[rocB]]-[[rocC]]'' | ||
* ''[[rocD]]-[[rocE]]-[[rocF]]'' | |||
* ''[[scoC]]'' | |||
* ''[[rocD]] | * ''[[srfAA]]-[[srfAB]]-[[comS]]-[[srfAC]]-[[srfAD]]'' | ||
* ''[[thrD]]'' | |||
* ''[[ureA]]-[[ureB]]-[[ureC]]'' | |||
* ''[[ | * ''[[vpr]]'' | ||
* ''[[srfAA]] | |||
* ''[[ | |||
* ''[[ureA]] | |||
* ''[[ | |||
* ''[[ybgE]]'' | * ''[[ybgE]]'' | ||
* ''[[ycgA]]'' | * ''[[ycgA]]'' | ||
* ''[[yhjC]]'' | * ''[[yhjC]]'' | ||
* ''[[ykfA]]'' | * ''[[ykfA]]'' | ||
| Line 127: | Line 88: | ||
* ''[[ykfD]]'' | * ''[[ykfD]]'' | ||
* ''[[ylmA]]'' | * ''[[ylmA]]'' | ||
* ''[[ | * ''[[yoyD]]'' | ||
* ''[[yuiA]]'' | * ''[[yuiA]]'' | ||
* ''[[yuiB]]'' | * ''[[yuiB]]'' | ||
* ''[[yuiC]]'' | * ''[[yuiC]]'' | ||
* ''[[yurJ]]'' | * ''[[yurJ]]'' | ||
* ''[[ | * ''[[ywaA]]'' | ||
* ''[[yxaM]]'' | * ''[[yxaM]]'' | ||
* ''[[yxbA]]'' | * ''[[yxbA]]'' | ||
| Line 144: | Line 102: | ||
= Important publications on the [[CodY]] regulon = | = Important publications on the [[CodY]] regulon = | ||
<pubmed>18083814 17982469 15802253 12618455 </pubmed> | <pubmed>18083814 17982469 15802253 12618455 23569278 24462007 24843172 </pubmed> | ||
=Back to [[regulons]]= | =Back to [[regulons]]= | ||
Latest revision as of 17:43, 5 June 2016
| Regulator | |
Genes in this regulon
Activation
Repression
- acsA
- amhX
- ansZ
- appA/1
- appA/2
- appB
- appC
- appD
- appF
- aprE
- argC-argJ-argB-argD-carA-carB-argF
- asnH
- bacA
- bacB
- bacC
- bacD
- bacE
- bacF
- bacG
- bcaP
- bkdR
- braB
- citB
- clpQ
- clpY
- codV
- codY
- comK
- dppA
- dppB
- dppC
- dppD
- dppE
- flgB-flgC-fliE-fliF-fliG-fliH-fliI-fliJ-ylxF-fliK-flgD-flgE-fliL-fliM-fliY-cheY-fliZ-fliP-fliQ-fliR-flhB-flhA-flhF-flhG-cheB-cheA-cheW-cheC-cheD-sigD-swrB
- frlB-frlO-frlN-frlM-frlD
- gabP
- hag
- hom-thrC-thrB
- hutP-hutH-hutU-hutI-hutG-hutM
- ilvA-ypmP
- ilvB-ilvH-ilvC-leuA-leuB-leuC-leuD
- ilvD
- ispA
- kapB
- kinB
- mpr
- nprE
- nupN-nupO-nupP-nupQ
- oppA-oppB-oppC-oppD-oppF
- phrA
- phrC
- phrE
- ptb-bcd-buk-lpdV-bkdAA-bkdAB-bkdB
- putB-putC
- rapA
- rapC
- rapE
- rocA-rocB-rocC
- rocD-rocE-rocF
- scoC
- srfAA-srfAB-comS-srfAC-srfAD
- thrD
- ureA-ureB-ureC
- vpr
- ybgE
- ycgA
Important publications on the CodY regulon
<pubmed>18083814 17982469 15802253 12618455 23569278 24462007 24843172 </pubmed>