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| * '''Description:''' required for cell shape determination <br/><br/>
| | {{#bank: RodZ}} |
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| {| align="right" border="1" cellpadding="2"
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| |style="background:#ABCDEF;" align="center"|'''Gene name'''
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| |''rodZ''
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| |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''ymfM ''
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| |style="background:#ABCDEF;" align="center"| '''Essential''' || may be essential {{PubMed|23879732}}
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| |style="background:#ABCDEF;" align="center"| '''Product''' || morphogenic protein
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| |style="background:#ABCDEF;" align="center"|'''Function''' || required for cell shape determination
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16910 rodZ]
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| |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RodZ RodZ]
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| |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 4.679
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| |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 639 bp, 213 aa
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| |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ymfK/2]]'', ''[[pgsA]]''
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| |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU16910 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU16910 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU16910 DNA_with_flanks]
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| |colspan="2" | '''Genetic context''' <br/> [[Image:ymfM_context.gif]]
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| <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
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| |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ymfM_1761707_1762573_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:rodZ_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU16910]]
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| |}
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| __TOC__
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/><br/><br/>
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| <br/><br/>
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| = [[Categories]] containing this gene/protein =
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| {{SubtiWiki category|[[cell shape]]}},
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| {{SubtiWiki category|[[membrane proteins]]}}
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| = This gene is a member of the following [[regulons]] =
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| =The gene=
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| === Basic information ===
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| * '''Locus tag:''' BSU16910
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| ===Phenotypes of a mutant ===
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| * may be essential {{PubMed|23879732}}
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| * depletion results in the formation of shorter and rounder cells {{PubMed|23879732}}
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| === Database entries ===
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| * '''DBTBS entry:''' no entry
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| * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13433]
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| === Additional information===
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| =The protein=
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| === Basic information/ Evolution ===
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| * '''Catalyzed reaction/ biological activity:'''
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| * '''Protein family:'''
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| * '''Paralogous protein(s):'''
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| === Extended information on the protein ===
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| * '''Kinetic information:'''
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| * '''Domains:'''
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| * '''Modification:'''
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| * '''Cofactor(s):'''
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| * '''Effectors of protein activity:'''
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| * '''[[SubtInteract|Interactions]]:'''
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| ** part of the [[cell wall biosynthetic complex]] {{PubMed|21636744,21636745}}
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| ** [[RodZ]]-[[MreD]] {{PubMed|23879732}}
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| ** [[RodZ]]-[[MreB]] {{PubMed|23879732}}
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| ** [[RodZ]]-[[MreBH]] {{PubMed|23879732}}
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| ** [[RodZ]]-[[Mbl]] {{PubMed|23879732}}
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| * '''[[Localization]]:'''
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| ** membrane protein (according to Swiss Prot)
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| === Database entries ===
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| * '''Structure:'''
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| * '''UniProt:''' [http://www.uniprot.org/uniprot/O31771 O31771]
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| * '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU16910]
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| * '''E.C. number:'''
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| === Additional information===
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| * overexpression results in growth inhibition in minimal medium (in the absence of Mg2+ ) {{PubMed|19164570}}
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| * RodZ is destabilized in a ''[[mreB]]'' mutant {{PubMed|23879732}}
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| =Expression and regulation=
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| * '''Operon:'''
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| * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ymfM_1761707_1762573_1 rodZ] {{PubMed|22383849}}
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| * '''Sigma factor:'''
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| * '''Regulation:'''
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| * '''Regulatory mechanism:'''
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| * '''Additional information:'''
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| =Biological materials =
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| * '''Mutant:'''
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| * '''Expression vector:'''
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| * '''lacZ fusion:'''
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| * '''GFP fusion:'''
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| * '''two-hybrid system:'''
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| * '''Antibody:'''
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| =Labs working on this gene/protein=
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| [[Adriano Henriques]], Lisbon, Portugal [http://www.itqb.unl.pt/research/biology/microbial-development homepage]
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| =Your additional remarks=
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| =References=
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| <pubmed>19164570, 21636744,21636745 23879732</pubmed>
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| [[Category:Protein-coding genes]]
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