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AzlB: Difference between revisions

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* '''Description:''' transcriptional repressor of the ''[[azlB]]-[[azlC]]-[[azlD]]-[[brnQ]]-[[yrdK]]'' operon <br/><br/>
{{#bank: AzlB}}


{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''azlB''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''yrdG ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of branched-chain amino acid transport
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 17 kDa, 4.867 
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 471 bp, 157 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[azlC]]'', ''[[yrdF]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14613&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:azlB_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}
__TOC__
<br/><br/>
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[biosynthesis/ acquisition of amino acids]]}},
{{SubtiWiki category|[[utilization of amino acids]]}},
{{SubtiWiki category|[[transcription factors and their control]]}},
{{SubtiWiki category|[[membrane proteins]]}}
= This gene is a member of the following [[regulons]] =
{{SubtiWiki regulon|[[AzlB regulon]]}}
=The [[AzlB regulon]]:=
* ''[[azlB]]-[[azlC]]-[[azlD]]-[[brnQ]]-[[yrdK]]''
=The gene=
=== Basic information ===
* '''Locus tag:''' BSU26720
===Phenotypes of a mutant ===
=== Database entries ===
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/azlBCD-brnQ-yrdK.html]
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG11914]
=== Additional information===
[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=azlB_2729753_2730226_-1 Expression]
=The protein=
=== Basic information/ Evolution ===
* '''Catalyzed reaction/ biological activity:'''
* '''Protein family:'''
* '''Paralogous protein(s):'''
=== Extended information on the protein ===
* '''Kinetic information:'''
* '''Domains:'''
* '''Modification:'''
* '''Cofactor(s):'''
* '''Effectors of protein activity:'''
* '''[[SubtInteract|Interactions]]:'''
* '''[[Localization]]:''' cell membrane (according to Swiss-Prot)
=== Database entries ===
* '''Structure:'''
* '''UniProt:''' [http://www.uniprot.org/uniprot/O07920 O07920]
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU26720]
* '''E.C. number:'''
=== Additional information===
=Expression and regulation=
* '''Operon:''' ''[[azlB]]-[[azlC]]-[[azlD]]-[[brnQ]]-[[yrdK]]'' [http://www.ncbi.nlm.nih.gov/sites/entrez/9287000 PubMed]
* '''[[Sigma factor]]:'''
* '''Regulation:''' repressed by [[AzlB]] [http://www.ncbi.nlm.nih.gov/sites/entrez/9287000 PubMed]
* '''Regulatory mechanism:''' [[AzlB]]: transcriptional repression [http://www.ncbi.nlm.nih.gov/sites/entrez/9287000 PubMed]
* '''Additional information:'''
=Biological materials =
* '''Mutant:'''
* '''Expression vector:'''
       
* '''lacZ fusion:'''
* '''GFP fusion:'''
* '''two-hybrid system:'''
* '''Antibody:'''
=Labs working on this gene/protein=
=Your additional remarks=
=References=
<pubmed>9287000,, </pubmed>
[[Category:Protein-coding genes]]

Latest revision as of 14:19, 2 April 2014