yclH

168

similar to ABC transporter (ATP-binding protein)

Locus: BSU_03730

Molecular weight: 25.06 kDa

Isoelectric point: 8.17

Protein length: 226 aa

Gene length: 681 bp

Function: unknown

Product: ABC transporter (ATP-binding protein)

Essential: no

Synonyms: yclH

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1136 (Galperin et al., 2021)

Gene

Coordinates: 424,208 → 424,888

The protein

Protein family

• ABC transporter superfamily (according to UniProt)

Domains

• ABC transporter domain (aa 4-226) (according to UniProt)

Structure

• 1L2T (PDB) (from Methanocaldococcus jannaschii, 33% identity) PubMed
• P94411 (AlphaFold)

Paralogous protein(s)

• YvrO

Localization

• membrane associated (via YclI) PubMed

Expression and Regulation

Operons

• Genes: yclI-yclH

  Description: PubMed

  Regulatory mechanism

  • YclJ: activation, PubMed, in yclJ regulon

Biological materials

Mutant

• MGNA-C005 (yclH::erm), available at the NBRP B. subtilis, Japan
• BKE03730 (ΔyclH::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TAAGCTCATAGGTTCCGCCT,  downstream forward: _UP4_TAACAAAACGCGCCTCTGCC
• BKK03730 (ΔyclH::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TAAGCTCATAGGTTCCGCCT,  downstream forward: _UP4_TAACAAAACGCGCCTCTGCC

References

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