yqxK

168

similar to lesion-specific endonuclease EndoQ, binds to DNA lesions, may be involved in DNA repair

Locus: BSU_23600

Molecular weight: 32.03 kDa

Isoelectric point: 8.45

Protein length: 387 aa

Gene length: 1164 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: yqxK, yqkH

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG1379 (Galperin et al., 2021)

Gene

Coordinates: 2,457,349  2,458,512

The protein

Catalyzed reaction/ biological activity

• binds to abasic DNA lesions PubMed

Structure

• 5ZB8 (PDB) (from Pyrococcus furiosus, 34% identity)
• P38423 (AlphaFold)

Expression and Regulation

Operons

• Genes: nudF-yqxK

  Description: PubMed

Biological materials

Mutant

• BKE23600 (yqxK::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTGCAAATCCGCGTAAATCT,  downstream forward: _UP4_AAAATTAAACCGTGAGCTAA
• BKK23600 (yqxK::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTGCAAATCCGCGTAAATCT,  downstream forward: _UP4_AAAATTAAACCGTGAGCTAA

References

Research papers

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