Difference between revisions of "YfnG"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU07280&redirect=T BSU07280]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yfnHGFED.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yfnHGFED.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU07280&redirect=T BSU07280]
  
 
* '''Structure:'''
 
* '''Structure:'''

Revision as of 13:10, 2 April 2014

  • Description: similar to CDP-glucose 4,6-dehydratase

Gene name yfnG
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yfnG
MW, pI 33 kDa, 5.341
Gene length, protein length 903 bp, 301 aa
Immediate neighbours yfnH, yfnF
Sequences Protein DNA DNA_with_flanks
Genetic context
YfnG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YfnG expression.png















Categories containing this gene/protein

poorly characterized/ putative enzymes, sporulation proteins

This gene is a member of the following regulons

SigK regulon

The gene

Basic information

  • Locus tag: BSU07280

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: sugar epimerase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed during sporulation (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Patrick Eichenberger, Masaya Fujita, Shane T Jensen, Erin M Conlon, David Z Rudner, Stephanie T Wang, Caitlin Ferguson, Koki Haga, Tsutomu Sato, Jun S Liu, Richard Losick
The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.
PLoS Biol: 2004, 2(10);e328
[PubMed:15383836] [WorldCat.org] [DOI] (I p)