ydeM

168

similar to dehydratase

locus: BSU_05250

Molecular weight: 16.02 kDa

pI: 4.91

Protein length: 141 aa

Gene length: 426 bp

function: unknown

product: unknown

essential: no

synonyms: ydeM

List of homologs in different organisms, belongs to COG2030 (Galperin et al., 2021)

Gene

Coordinates: 572,974 → 573,399

The protein

[wiki|Domains]

• MaoC-like domain (aa 8-112) (according to UniProt)

Structure

• [PDB|3EXZ] (from Rhodospirillum rubrum, 38% identity)
• [AF|P96670]

Biological materials

Mutant

• MGNA-C135 (ydeM::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2133 NBRP B. subtilis, Japan]
• BKE05250 (Δ[gene|E0C883E066E2E04C0464A15A0F3037F7AE102345|ydeM]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE05250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCTTACACCTCTATTTT,  downstream forward: _UP4_TAACTCAGAAAGCCCGCTTT
• BKK05250 (Δ[gene|E0C883E066E2E04C0464A15A0F3037F7AE102345|ydeM]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK05250 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTCTTACACCTCTATTTT,  downstream forward: _UP4_TAACTCAGAAAGCCCGCTTT