xkdW

168

PBSX prophage

Locus: BSU_12760

Molecular weight: 12.59 kDa

Isoelectric point: 4.42

Protein length: 109 aa

Gene length: 330 bp

Function: unknown

Product: unknown

Essential: no

Synonyms: xkdW

Genomic Context

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List of homologs in different organisms

Gene

Coordinates: 1,345,305  1,345,634

The protein

Structure

• 2HG7 (PDB) ( NMR)
• P54342 (AlphaFold)

Paralogous protein(s)

• YqcD

Expression and Regulation

Operons

• Genes: xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM-xkdN-xkzB-xkdO-xkdP-xkdQ-xkdR-xkdS-xkdT-xkdU-xkzA-xkdV-xkdW-xkdX-xepA-xhlA-xhlB-xlyA

  Description: PubMed

  Regulation

  • expression during spore germination is strongly reduced under conditions of osmotic stress PubMed

  Sigma factors

  • Xpf: sigma factor, PubMed, in xpf regulon

Biological materials

Mutant

• BKE12760 (xkdW::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ATATAAGATCATAAAGGTAC,  downstream forward: _UP4_TCCTTGAAAGGAGATTATGC
• BKK12760 (xkdW::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ATATAAGATCATAAAGGTAC,  downstream forward: _UP4_TCCTTGAAAGGAGATTATGC