yrdQ

168

similar to transcriptional regulator (LysR family)

Locus: BSU_26630

Molecular weight: 32.51 kDa

Isoelectric point: 7.26

Protein length: 288 aa

Gene length: 867 bp

Function: unknown

Product: transcriptional regulator (LysR family)

Essential: no

Synonyms: yrdQ

Genomic Context

Hide small RNAsZoom:

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

Gene

Coordinates: 2,721,778 → 2,722,644

The protein

Protein family

• LysR family (according to UniProt)

Domains

• HTH lysR-type domain (aa 1-58) (according to UniProt)

Structure

• 2H98 (PDB) (from Acinetobacter baylyi, 23% identity)
• P71025 (AlphaFold)

Biological materials

Mutant

• MGNA-B510 (yrdQ::erm), available at the NBRP B. subtilis, Japan
• BKE26630 (ΔyrdQ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAAGATCCCCCCTTCAT,  downstream forward: _UP4_TAAAGTGATTTTTCTCTTTC
• BKK26630 (ΔyrdQ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATGAAGATCCCCCCTTCAT,  downstream forward: _UP4_TAAAGTGATTTTTCTCTTTC