DhbB

From SubtiWiki
Revision as of 11:51, 8 April 2014 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: isochorismatase

Gene name dhbB
Synonyms
Essential no
Product isochorismatase
Function biosynthesis of the siderophore bacillibactin
Gene expression levels in SubtiExpress: dhbB
Metabolic function and regulation of this protein in SubtiPathways:
DhbB
MW, pI 34 kDa, 4.429
Gene length, protein length 936 bp, 312 aa
Immediate neighbours dhbF, dhbE
Sequences Protein DNA DNA_with_flanks
Genetic context
DhbB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DhbB expression.png















Categories containing this gene/protein

acquisition of iron, iron metabolism

This gene is a member of the following regulons

AbrB regulon, Fur regulon

The gene

Basic information

  • Locus tag: BSU31970

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Isochorismate + H2O = 2,3-dihydroxy-2,3-dihydrobenzoate + pyruvate (according to Swiss-Prot)
  • Protein family: isochorismatase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • induced by iron starvation (Fur) PubMed
    • strongly repressed in response to glucose starvation in M9 medium PubMed
  • Regulatory mechanism:
  • Additional information:
    • the amount of the mRNA is substantially decreased upon depletion of RNase Y PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References