YbcM

• Description: similar to glucosamine-fructose-6-phosphate aminotransferase
  
  

Gene name	ybcM
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: ybcM
MW, pI	11 kDa, 4.787
Gene length, protein length	312 bp, 104 aa
Immediate neighbours	ybcL, skfA
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

utilization of specific carbon sources, membrane proteins, prophage 1

The gene

Basic information

• Locus tag: BSU01900

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • cell membrane (according to Swiss-Prot)

Database entries

• Structure:

• UniProt: O31421

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ybcM PubMed

• Sigma factor:

• Regulation: induced by rhamnogalacturonan PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Akihito Ochiai, Takafumi Itoh, Akiko Kawamata, Wataru Hashimoto, Kousaku Murata
Plant cell wall degradation by saprophytic Bacillus subtilis strains: gene clusters responsible for rhamnogalacturonan depolymerization.
Appl Environ Microbiol: 2007, 73(12);3803-13
[PubMed:17449691] [WorldCat.org] [DOI] (P p)