MutTA

From SubtiWiki
Revision as of 14:22, 16 May 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: error prevention oxidized guanine system, confers protection against oxidative stress to vegetative cells, moreover the protein has RNA pyrophosphohydrolase activity

Gene name mutTA
Synonyms ytkD, rppH
Essential no
Product 8-oxo-dGTPase (antimutator), RNA pyrophosphohydrolase
Function DNA repair, RNA degradation
Gene expression levels in SubtiExpress: mutTA
MW, pI 18 kDa, 5.952
Gene length, protein length 474 bp, 158 aa
Immediate neighbours ytlD, ytkC
Sequences Protein DNA DNA_with_flanks
Genetic context
YtkD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
MutTA expression.png















Categories containing this gene/protein

DNA repair/ recombination, sporulation proteins, RNases

This gene is a member of the following regulons

SigF regulon

The gene

Basic information

  • Locus tag: BSU30630

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • removal of pyrophosphate from the 5' end of mRNAs to make the RNA accessible for degradation by RNases PubMed
    • RppH requires at least two unpaired nucleotides at the 5' end of its RNA substrates and prefers three or more. The second of these 5'-terminal nucleotides must be G, whereas a less strict preference for a purine is evident at the third position, and A is slightly favored over G at the first position PubMed
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed during logarithmic growth (SigA) and early during sporulation in the forespore (SigF) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications