YndB

From SubtiWiki
Revision as of 13:28, 16 May 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: may be involved in the stress response of B. subtilis to chalcone-like flavonoids released by plants due to a pathogen infection

Gene name yndB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yndB
MW, pI 15 kDa, 4.597
Gene length, protein length 432 bp, 144 aa
Immediate neighbours yndA, ynzB
Sequences Protein DNA DNA_with_flanks
Genetic context
YndB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YndB expression.png















Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU17730

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: AHA1 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jaime L Stark, Kelly A Mercier, Geoffrey A Mueller, Thomas B Acton, Rong Xiao, Gaetano T Montelione, Robert Powers
Solution structure and function of YndB, an AHSA1 protein from Bacillus subtilis.
Proteins: 2010, 78(16);3328-40
[PubMed:20818668] [WorldCat.org] [DOI] (I p)

Kelly A Mercier, Geoffrey A Mueller, Thomas B Acton, Rong Xiao, Gaetano T Montelione, Robert Powers
(1)H, (13)C, and (15)N NMR assignments for the Bacillus subtilis yndB START domain.
Biomol NMR Assign: 2009, 3(2);191-4
[PubMed:19888688] [WorldCat.org] [DOI] (I p)