YkfA

From SubtiWiki
Revision as of 13:04, 16 May 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: similar to immunity to bacteriotoxins

Gene name ykfA
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ykfA
MW, pI 25 kDa, 5.409
Gene length, protein length 702 bp, 234 aa
Immediate neighbours dppE, ykfB
Sequences Protein DNA DNA_with_flanks
Genetic context
YkfA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkfA expression.png















Categories containing this gene/protein

toxins, antitoxins and immunity against toxins

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU12970

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: peptidase S66 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulatory mechanism: CodY: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Virginie Molle, Yoshiko Nakaura, Robert P Shivers, Hirotake Yamaguchi, Richard Losick, Yasutaro Fujita, Abraham L Sonenshein
Additional targets of the Bacillus subtilis global regulator CodY identified by chromatin immunoprecipitation and genome-wide transcript analysis.
J Bacteriol: 2003, 185(6);1911-22
[PubMed:12618455] [WorldCat.org] [DOI] (P p)