RnmV

• Description: RNase M5
  
  

Gene name	rnmV
Synonyms	yabF
Essential	no
Product	endoribonuclease M5
Function	5S ribosomal RNA maturation
Gene expression levels in SubtiExpress: rnmV
MW, pI	20 kDa, 6.681
Gene length, protein length	558 bp, 186 aa
Immediate neighbours	yabE, ksgA
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

Rnases, translation

The gene

Basic information

• Locus tag: BSU00410

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains: N-terminal part: Toprim domain PubMed

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:
  • cytoplasm (homogeneous) PubMed

Database entries

• Structure:

• UniProt: P37547

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: rnmV-ksgA PubMed

• Expression browser: rnmV PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

Labs working on this gene/protein

Ciaran Condon, IBPC, Paris, France Homepage

References

Jean-Christophe Meile, Ling Juan Wu, S Dusko Ehrlich, Jeff Errington, Philippe Noirot
Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory.
Proteomics: 2006, 6(7);2135-46
[PubMed:16479537] [WorldCat.org] [DOI] (P p)

Frédéric Allemand, Nathalie Mathy, Dominique Brechemier-Baey, Ciarán Condon
The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member.
Nucleic Acids Res: 2005, 33(13);4368-76
[PubMed:16077031] [WorldCat.org] [DOI] (I e)

Ciarán Condon, Jordi Rourera, Dominique Brechemier-Baey, Harald Putzer
Ribonuclease M5 has few, if any, mRNA substrates in Bacillus subtilis.
J Bacteriol: 2002, 184(10);2845-9
[PubMed:11976317] [WorldCat.org] [DOI] (P p)

C Condon, D Brechemier-Baey, B Beltchev, M Grunberg-Manago, H Putzer
Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function.
RNA: 2001, 7(2);242-53
[PubMed:11233981] [WorldCat.org] [DOI] (P p)