YwqL

From SubtiWiki
Revision as of 16:44, 7 August 2012 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: endonuclease V

Gene name ywqL
Synonyms
Essential no
Product endonuclease V
Function DNA repair
Gene expression levels in SubtiExpress: ywqL
MW, pI 26 kDa, 5.707
Gene length, protein length 714 bp, 238 aa
Immediate neighbours ywqM, ywqK
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YwqL context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwqL expression.png
























Categories containing this gene/protein

DNA repair/ recombination

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU36170

Phenotypes of a mutant

  • increased mutation rates PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Endonucleolytic cleavage at apurinic or apyrimidinic sites to products with a 5'-phosphate (according to Swiss-Prot)
  • Protein family: endonuclease V family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
    • expressed throughout growth and staionary phase PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References