YlaD

• Description: anti-Sigma(YlaC)
  
  

Gene name	ylaD
Synonyms
Essential	no
Product	anti-Sigma(YlaC)
Function	control of sigma factor YlaC
Gene expression levels in SubtiExpress: ylaD
Interactions involving this protein in SubtInteract: YlaD
MW, pI	11 kDa, 4.473
Gene length, protein length	291 bp, 97 aa
Immediate neighbours	ylaC, ylaE
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

sigma factors and their control, membrane proteins

This gene is a member of the following regulons

Spx regulon, YlaC regulon

The gene

Basic information

• Locus tag: BSU14740

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:
  • YlaC-YlaD PubMed

• Localization: cell membrane (according to Swiss-Prot)

Database entries

• Structure:

• UniProt: O07628

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon:
  • ylaA-ylaB-ylaC-ylaD PubMed
  • ylaC-ylaD PubMed

• Expression browser: ylaD PubMed

• Sigma factor:
  • ylaA: YlaC PubMed
  • ylaC: SigA PubMed

• Regulation:
  • Spx: transcription activation PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Han-Bong Ryu, Inji Shin, Hyung-Soon Yim, Sa-Ouk Kang
YlaC is an extracytoplasmic function (ECF) sigma factor contributing to hydrogen peroxide resistance in Bacillus subtilis.
J Microbiol: 2006, 44(2);206-16
[PubMed:16728958] [WorldCat.org] (P p)

Takashi Matsumoto, Kaoru Nakanishi, Kei Asai, Yoshito Sadaie
Transcriptional analysis of the ylaABCD operon of Bacillus subtilis encoding a sigma factor of extracytoplasmic function family.
Genes Genet Syst: 2005, 80(6);385-93
[PubMed:16501307] [WorldCat.org] [DOI] (P p)