YabE

Gene name	yabE
Synonyms
Essential	no
Product	unknown
Function	unknown
Gene expression levels in SubtiExpress: yabE
MW, pI	47 kDa, 9.282
Gene length, protein length	1311 bp, 437 aa
Immediate neighbours	yabD, rnmV
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

cell wall/ other

The gene

Basic information

• Locus tag: BSU00400

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains: contains a SPS domain

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• UniProt: P37546

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: yabE PubMed

• Expression browser: yabE PubMed

• Sigma factor: SigA PubMed

• Regulation:

• Regulatory mechanism:

• Additional information: expression is negatively controlled by a cis-acting antisense RNA that is dependent on SigX and SigM PubMed

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

References

Warawan Eiamphungporn, John D Helmann
Extracytoplasmic function sigma factors regulate expression of the Bacillus subtilis yabE gene via a cis-acting antisense RNA.
J Bacteriol: 2009, 191(3);1101-5
[PubMed:19047346] [WorldCat.org] [DOI] (I p)