YabE

From SubtiWiki
Revision as of 12:22, 18 April 2012 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: similar to cell wall binding protein

Gene name yabE
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 47 kDa, 9.282
Gene length, protein length 1311 bp, 437 aa
Immediate neighbours yabD, rnmV
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YabE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YabE expression.png
























Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU00400

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains: contains a SPS domain
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information: expression is negatively controlled by a cis-acting antisense RNA that is dependent on SigX and SigM PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

John Helmann, Cornell University, USA Homepage

Your additional remarks

References

Warawan Eiamphungporn, John D Helmann
Extracytoplasmic function sigma factors regulate expression of the Bacillus subtilis yabE gene via a cis-acting antisense RNA.
J Bacteriol: 2009, 191(3);1101-5
[PubMed:19047346] [WorldCat.org] [DOI] (I p)