Talk:SubtiPathways
Discovered something unusual in the diagrams? Please leave a comment in the corresponding section!
Contents
General comments about all diagrams
- There seem to be some compatibility problems using Google Chrome. Nonetheless, Mozilla Firefox, Netscape, Microsoft Explorer, Safari, and Opera are working properly.
- Comments in brackets have been changed in the original files, but have not been uploaded yet.
Carbon metabolism
Central carbon metabolism
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Utilization of different carbon sources
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Nitrogen and amino acid metabolism
Ammonium assimilation and glutamate metabolism (incl. glutamine and arginine)
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Alanine, glycine, serine
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Aspartate, asparagine
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Cysteine, methionine
- Repel: Eventuell Einbindung von Extramarkern für die S-Box (bzw. alle riboswitches)???? Es gibt ja dafür extra Seiten im Subtiwiki. Sollte man aber erst mal mit Lope und Arne diskutieren (Jörg)
- Cystin-Aufnahme-Systeme mit aufnehmen: TcyP, TcyABC, TcyJKLMN (Jörg)
Histidine
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Isoleucine, valine, leucine
- Isoleucin-Abbau: Bcd und YwaA sind zwei unterschiedliche Reaktionen, Bcd geht mit NAD, nicht mit 2-KG (Jörg)
Lysine, threonine
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Phenylalanine, tyrosine, tryptophan
- Reaktionen Chorismat ---> Folat --> jetzt vielleicht Verlinkung zu den entsprechenden Diagrammen?
Proline
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Lipid metabolism
Fatty acid and phospholipid biosynthesis
- The structure of PDGP is wrong (although the name, CDP-diacylglycerol, seems right). Wrong PubChem ID?
- The same applies for phosphatidylglycerol, L-serine, and others.
Fatty acid degradation
Nucleotides
Gene regulation of nucleotides
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Nucleosides catabolism
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Purine metabolism
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Purine catabolism
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Purine salvage pathways
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Pyrimidine metabolism
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Metabolism of cofactors
CoA synthesis
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Folate biosynthesis
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Menaquinone
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Riboflavin and FAD synthesis
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Thiamin synthesis
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Other pathways
Cellwall
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Stress response
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Phosphorelay
Sulfate assimilation
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tRNA charging
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