RnmV

• Description: RNase M5
  
  

Gene name	rnmV
Synonyms	yabF
Essential	no
Product	endoribonuclease M5
Function	5S ribosomal RNA maturation
MW, pI	20 kDa, 6.681
Gene length, protein length	558 bp, 186 aa
Immediate neighbours	yabE, ksgA
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

The gene

Basic information

• Coordinates:

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family:

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains: N-terminal part: Toprim domain PubMed

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization: Cytoplasm (Homogeneous) PubMed cytoplasm (homogeneous) PubMed

Database entries

• Structure:

• Swiss prot entry:

• KEGG entry: [3]

• E.C. number:

Expression and regulation

• Operon: rnmV-ksgA PubMed

• Sigma factor:

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

Labs working on this gene/protein

Ciaran Condon, IBPC, Paris, France Homepage

References

1. Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6: 2135-2146. PubMed

1. Meile et al. (2006) Systematic localisation of proteins fused to the green fluorescent protein in Bacillus subtilis: identification of new proteins at the DNA replication factory Proteomics 6(7): 2135-46. PubMed
2. Condon et al. (2001) Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function. RNA 7: 242-253. PubMed
3. Condon, C., Rourera, J., Brechemier-Baey, D. & Putzer, H. (2002). Ribonuclease M5 has few, if any, mRNA substrates in Bacillus subtilis. J Bacteriol 184, 2845-2849. PubMed
4. Allemand et al. (2005) The 5S rRNA maturase, ribonuclease M5, is a Toprim domain family member. Nucl. Acids Res 33: 4368-4376. PubMed
5. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed