SpsJ

From SubtiWiki
Revision as of 15:06, 2 April 2014 by 134.76.38.147 (talk)
Jump to: navigation, search
  • Description: dTDP -glucose-4,6-dehydratase, spore coat polysaccharide synthesis

Gene name spsJ
Synonyms ipa-72d
Essential no
Product dTDP -glucose-4,6-dehydratase
Function rhamnose biosynthesis, spore coat polysaccharide synthesis
Gene expression levels in SubtiExpress: spsJ
MW, pI 35 kDa, 6.286
Gene length, protein length 945 bp, 315 aa
Immediate neighbours spsK, spsI
Sequences Protein DNA DNA_with_flanks
Genetic context
SpsJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpsJ expression.png















Categories containing this gene/protein

miscellaneous metabolic pathways, sporulation proteins

This gene is a member of the following regulons

SigE regulon, SigK regulon

The gene

Basic information

  • Locus tag: BSU37830

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • dTDP-glucose --> dTDP-4-dehydro-6-deoxyglucose PubMed
  • Protein family: sugar epimerase family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the mother cell (SigK) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References