YkfB

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  • Description: L-Ala-D/L-Glu epimerase

Gene name ykfB
Synonyms
Essential no
Product L-Ala-D/L-Glu epimerase
Function cell wall metabolism
Gene expression levels in SubtiExpress: ykfB
MW, pI 39 kDa, 5.905
Gene length, protein length 1098 bp, 366 aa
Immediate neighbours ykfA, ykfC
Sequences Protein DNA DNA_with_flanks
Genetic context
YkfB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YkfB expression.png















Categories containing this gene/protein

cell wall/ other

This gene is a member of the following regulons

CodY regulon

The gene

Basic information

  • Locus tag: BSU12980

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1TKK (complex with substrate), 1JPM
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulatory mechanism: CodY: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References