RpmE

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Gene name rpmE
Synonyms
Essential no PubMed
Product ribosomal protein L31
Function translation
Gene expression levels in SubtiExpress: rpmE
Interactions involving this protein in SubtInteract: RpmE
MW, pI 7 kDa, 9.157
Gene length, protein length 198 bp, 66 aa
Immediate neighbours tdk, rho
Sequences Protein DNA DNA_with_flanks
Genetic context
RpmE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RpmE expression.png















Categories containing this gene/protein

translation

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU37070

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Type A subfamily (according to Swiss-Prot)
  • Paralogous protein(s): YtiA

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: Zn(2+) PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Under conditions of zinc starvation, RpmE is replaced by its paralog YtiA, that does not require zinc PubMed


Expression and regulation

  • Sigma factor:
  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed