SpeD

• Description: S-adenosylmethionine decarboxylase
  
  

Gene name	speD
Synonyms	ytcF
Essential	no
Product	S-adenosylmethionine decarboxylase
Function	spermidine, polyamine biosynthesis
MW, pI	13 kDa, 4.768
Gene length, protein length	384 bp, 128 aa
Immediate neighbours	ytcG, gapB
Get the DNA and protein sequences (Barbe et al., 2009)
Genetic context This image was kindly provided by SubtiList

The gene

Basic information

• Coordinates:

Database entries

• DBTBS entry: [1]

• SubtiList entry: [2]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity: S-adenosyl-L-methionine = (5-deoxy-5-adenosyl)(3-aminopropyl)-methylsulfonium salt + CO₂ (according to Swiss-Prot)

• Protein family: Type 1 subfamily (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:

• Localization:

Database entries

• Structure:

• Swiss prot entry: O34426

• KEGG entry: BSU29010

• E.C. number: 4.1.1.50

Expression and regulation

• Operon: gapB-speD, speD

• Sigma factor: SigA

• Regulation:

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed