Stusti 2018

Die Sprache der RNA: Von RNA-Schaltern zu CRISPR/ Cas

• Riboswitches

Laurène Bastet, Pierre Turcotte, Joseph T Wade, Daniel A Lafontaine
Maestro of regulation: Riboswitches orchestrate gene expression at the levels of translation, transcription and mRNA decay.
RNA Biol: 2018, 15(6);679-682
[PubMed:29537923] [WorldCat.org] [DOI] (I p)

Marc Vogel, Julia E Weigand, Britta Kluge, Manuel Grez, Beatrix Suess
A small, portable RNA device for the control of exon skipping in mammalian cells.
Nucleic Acids Res: 2018, 46(8);e48
[PubMed:29420816] [WorldCat.org] [DOI] (I p)

Etienne B Greenlee, Shira Stav, Ruben M Atilho, Kenneth I Brewer, Kimberly A Harris, Sarah N Malkowski, Gayan Mirihana Arachchilage, Kevin R Perkins, Madeline E Sherlock, Ronald R Breaker
Challenges of ligand identification for the second wave of orphan riboswitch candidates.
RNA Biol: 2018, 15(3);377-390
[PubMed:29135333] [WorldCat.org] [DOI] (I p)

James W Nelson, Ronald R Breaker
The lost language of the RNA World.
Sci Signal: 2017, 10(483);
[PubMed:28611182] [WorldCat.org] [DOI] (I e)

Hannah Steinert, Florian Sochor, Anna Wacker, Janina Buck, Christina Helmling, Fabian Hiller, Sara Keyhani, Jonas Noeske, Steffen Grimm, Martin M Rudolph, Heiko Keller, Rachel Anne Mooney, Robert Landick, Beatrix Suess, Boris Fürtig, Jens Wöhnert, Harald Schwalbe
Pausing guides RNA folding to populate transiently stable RNA structures for riboswitch-based transcription regulation.
Elife: 2017, 6;
[PubMed:28541183] [WorldCat.org] [DOI] (I e)

Joseph E Wedekind, Debapratim Dutta, Ivan A Belashov, Jermaine L Jenkins
Metalloriboswitches: RNA-based inorganic ion sensors that regulate genes.
J Biol Chem: 2017, 292(23);9441-9450
[PubMed:28455443] [WorldCat.org] [DOI] (I p)

Phillip J McCown, Keith A Corbino, Shira Stav, Madeline E Sherlock, Ronald R Breaker
Riboswitch diversity and distribution.
RNA: 2017, 23(7);995-1011
[PubMed:28396576] [WorldCat.org] [DOI] (I p)

Christopher P Jones, Adrian R Ferré-D'Amaré
Long-Range Interactions in Riboswitch Control of Gene Expression.
Annu Rev Biophys: 2017, 46;455-481
[PubMed:28375729] [WorldCat.org] [DOI] (I p)

Maja Etzel, Mario Mörl
Synthetic Riboswitches: From Plug and Pray toward Plug and Play.
Biochemistry: 2017, 56(9);1181-1198
[PubMed:28206750] [WorldCat.org] [DOI] (I p)

Svetlana V Harbaugh, Michael S Goodson, Kateri Dillon, Sarah Zabarnick, Nancy Kelley-Loughnane
Riboswitch-Based Reversible Dual Color Sensor.
ACS Synth Biol: 2017, 6(5);766-781
[PubMed:28121427] [WorldCat.org] [DOI] (I p)

Kyle E Watters, Eric J Strobel, Angela M Yu, John T Lis, Julius B Lucks
Cotranscriptional folding of a riboswitch at nucleotide resolution.
Nat Struct Mol Biol: 2016, 23(12);1124-1131
[PubMed:27798597] [WorldCat.org] [DOI] (I p)

Anna V Sherwood, Tina M Henkin
Riboswitch-Mediated Gene Regulation: Novel RNA Architectures Dictate Gene Expression Responses.
Annu Rev Microbiol: 2016, 70;361-74
[PubMed:27607554] [WorldCat.org] [DOI] (I p)

• Riboregulation and virulence

Juan J Quereda, Pascale Cossart
Regulating Bacterial Virulence with RNA.
Annu Rev Microbiol: 2017, 71;263-280
[PubMed:28886688] [WorldCat.org] [DOI] (I p)

Petra Dersch, Muna A Khan, Sabrina Mühlen, Boris Görke
Roles of Regulatory RNAs for Antibiotic Resistance in Bacteria and Their Potential Value as Novel Drug Targets.
Front Microbiol: 2017, 8;803
[PubMed:28529506] [WorldCat.org] [DOI] (P e)

Hao Wang, Paul A Mann, Li Xiao, Charles Gill, Andrew M Galgoci, John A Howe, Artjohn Villafania, Christopher M Barbieri, Juliana C Malinverni, Xinwei Sher, Todd Mayhood, Megan D McCurry, Nicholas Murgolo, Amy Flattery, Matthias Mack, Terry Roemer
Dual-Targeting Small-Molecule Inhibitors of the Staphylococcus aureus FMN Riboswitch Disrupt Riboflavin Homeostasis in an Infectious Setting.
Cell Chem Biol: 2017, 24(5);576-588.e6
[PubMed:28434876] [WorldCat.org] [DOI] (I p)

Andreas Matern, Danielle Pedrolli, Stephanie Großhennig, Jörgen Johansson, Matthias Mack
Uptake and Metabolism of Antibiotics Roseoflavin and 8-Demethyl-8-Aminoriboflavin in Riboflavin-Auxotrophic Listeria monocytogenes.
J Bacteriol: 2016, 198(23);3233-3243
[PubMed:27672192] [WorldCat.org] [DOI] (I e)

Aaron M Nuss, Ann Kathrin Heroven, Petra Dersch
RNA Regulators: Formidable Modulators of Yersinia Virulence.
Trends Microbiol: 2017, 25(1);19-34
[PubMed:27651123] [WorldCat.org] [DOI] (I p)

• RNA-based second messengers

Jan Gundlach, Christina Herzberg, Volkhard Kaever, Katrin Gunka, Tamara Hoffmann, Martin Weiß, Johannes Gibhardt, Andrea Thürmer, Dietrich Hertel, Rolf Daniel, Erhard Bremer, Fabian M Commichau, Jörg Stülke
##Title##
Sci Signal: 2017, 10(475);
[PubMed:28420751] [WorldCat.org] [DOI] (I e)

• Ribozymes

Matthew W L Lau, Adrian R Ferré-D'Amaré
In vitro evolution of coenzyme-independent variants from the glmS ribozyme structural scaffold.
Methods: 2016, 106;76-81
[PubMed:27130889] [WorldCat.org] [DOI] (I p)