YwpE

From SubtiWiki
Revision as of 11:28, 14 May 2013 by 134.76.70.252 (talk)
Jump to: navigation, search
  • Description: similar to sortase, but lacking the membrane anchor

Gene name ywpE
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: ywpE
MW, pI 11 kDa, 6.34
Gene length, protein length 306 bp, 102 aa
Immediate neighbours ywpF, ywpD
Sequences Protein DNA DNA_with_flanks
Genetic context
YwpE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YwpE expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU36340

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Thomas Spirig, Ethan M Weiner, Robert T Clubb
Sortase enzymes in Gram-positive bacteria.
Mol Microbiol: 2011, 82(5);1044-59
[PubMed:22026821] [WorldCat.org] [DOI] (I p)

Original publications

Additional referencecs: PubMed

Hamidreza Fasehee, Helga Westers, Albert Bolhuis, Haike Antelmann, Michael Hecker, Wim J Quax, Agha F Mirlohi, Jan Maareten van Dijl, Gholamreza Ahmadian
Functional analysis of the sortase YhcS in Bacillus subtilis.
Proteomics: 2011, 11(19);3905-13
[PubMed:21800427] [WorldCat.org] [DOI] (I p)

E Presecan, I Moszer, L Boursier, H Cruz Ramos, V de la Fuente, M-F Hullo, C Lelong, S Schleich, A Sekowska, B H Song, G Villani, F Kunst, A Danchin, P Glaser
The Bacillus subtilis genome from gerBC (311 degrees) to licR (334 degrees).
Microbiology (Reading): 1997, 143 ( Pt 10);3313-3328
[PubMed:9353933] [WorldCat.org] [DOI] (P p)