XynD

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  • Description: arabinoxylan arabinofuranohydrolase

Gene name xynD
Synonyms
Essential no
Product arabinoxylan arabinofuranohydrolase
Function arabinoxylan degradation
Gene expression levels in SubtiExpress: xynD
MW, pI 54 kDa, 8.031
Gene length, protein length 1539 bp, 513 aa
Immediate neighbours xynC, yngA
Sequences Protein DNA Advanced_DNA
Genetic context
XynD context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
XynD expression.png
























Categories containing this gene/protein

utilization of specific carbon sources

This gene is a member of the following regulons

AbrB regulon

The gene

Basic information

  • Locus tag: BSU18160

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Hydrolysis of terminal non-reducing alpha-L-arabinofuranoside residues in alpha-L-arabinosides (according to Swiss-Prot)
  • Protein family: glycosyl hydrolase 43 family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [2]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed