DegV

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  • Description: fatty acid binding protein

Gene name degV
Synonyms yviA, sacU
Essential no
Product fatty acid binding protein
Function unknown
MW, pI 31 kDa, 5.227
Gene length, protein length 843 bp, 281 aa
Immediate neighbours comFA, degU
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YviA context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
DegV expression.png
























Categories containing this gene/protein

lipid metabolism/ other

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU35480

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: Diphosphate + H2O = 2 phosphate (according to Swiss-Prot)
  • Protein family: UPF0230 (degV) family (according to Swiss-Prot) PpaX family (according to Swiss-Prot)
  • Paralogous protein(s): YitS

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Jie Nan, Yanfeng Zhou, Cheng Yang, Erik Brostromer, Ole Kristensen, Xiao Dong Su
Structure of a fatty-acid-binding protein from Bacillus subtilis determined by sulfur-SAD phasing using in-house chromium radiation.
Acta Crystallogr D Biol Crystallogr: 2009, 65(Pt 5);440-8
[PubMed:19390149] [WorldCat.org] [DOI] (I p)

J A Londoño-Vallejo, D Dubnau
comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.
Mol Microbiol: 1993, 9(1);119-31
[PubMed:8412657] [WorldCat.org] [DOI] (P p)