Difference between revisions of "Sandbox"
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− | * '''Description:''' 23S rRNA<br/><br/> | + | * '''Description:''' 23S rRNA <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"|'''Gene name''' | |style="background:#ABCDEF;" align="center"|'''Gene name''' | ||
− | |'' | + | |''rrnB-23S'' |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | |style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' '' | ||
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|style="background:#ABCDEF;" align="center"|'''Function''' || translation | |style="background:#ABCDEF;" align="center"|'''Function''' || translation | ||
|- | |- | ||
− | |style="background:#ABCDEF;" align="center"| '''Gene length''' || | + | |style="background:#ABCDEF;" align="center"| '''Gene length''' || 2927 bp |
+ | |-|- | ||
+ | |||
+ | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rrnB-5S]]'', ''[[rrnB-16S]]'' | ||
|- | |- | ||
− | |style="background:# | + | |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/rrnB-23S_nucleotide.txt Gene sequence (+200bp) ]''' |
+ | |style="background:#FAF8CC;" align="center"|''' ''' | ||
|- | |- | ||
− | + | |colspan="2" | '''Genetic context''' <br/> [[Image:rrnB-23S_context.gif]] | |
− | |||
− | |colspan="2" | '''Genetic context''' <br/> [[Image: | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
|- | |- | ||
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__TOC__ | __TOC__ | ||
− | + | <br/><br/> | |
+ | <br/><br/><br/><br/><br/> | ||
=The gene= | =The gene= | ||
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* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
− | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+ | + | * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG00072] |
− | + | ||
− | * '''Structure:''' | + | * '''Structure:''' |
=== Additional information=== | === Additional information=== | ||
− | |||
=Expression and regulation= | =Expression and regulation= | ||
− | * '''Operon:''' | + | * '''Operon:''' |
− | * '''Sigma factor:''' | + | * '''Sigma factor:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''lacZ fusion:''' | * '''lacZ fusion:''' | ||
− | * ''' | + | * '''GFP fusion:''' |
− | |||
− | |||
=Labs working on this gene/RNA= | =Labs working on this gene/RNA= | ||
Line 78: | Line 78: | ||
=References= | =References= | ||
− | <pubmed> | + | <pubmed>2414156, </pubmed> |
− | # | + | # Green CJ, Stewart GC, Hollis MA, Vold BS, Bott KF (1985) Nucleotide sequence of the ''Bacillus subtilis'' ribosomal RNA operon, ''rrnB''.''Nucl. Acids Res.'' '''37:''' 261-266. [http://www.ncbi.nlm.nih.gov/sites/entrez/2414156 PubMed] |
# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] | # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed] |
Revision as of 13:34, 8 June 2009
- Description: 23S rRNA
Gene name | rrnB-23S |
Synonyms | |
Essential | no |
Product | ribosomal RNA-23S |
Function | translation |
Gene length | 2927 bp |
Immediate neighbours | rrnB-5S, rrnB-16S |
Gene sequence (+200bp) | |
Genetic context This image was kindly provided by SubtiList
|
Contents
The gene
Basic information
- Locus tag:
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
- Structure:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
Labs working on this gene/RNA
Your additional remarks
References
C J Green, G C Stewart, M A Hollis, B S Vold, K F Bott
Nucleotide sequence of the Bacillus subtilis ribosomal RNA operon, rrnB.
Gene: 1985, 37(1-3);261-6
[PubMed:2414156]
[WorldCat.org]
[DOI]
(P p)