Difference between revisions of "IspG"

From SubtiWiki
Jump to: navigation, search
Line 35: Line 35:
 
=== Basic information ===
 
=== Basic information ===
  
* '''Locus tag:'''
+
* '''Locus tag:''' BSU25070
  
 
===Phenotypes of a mutant ===
 
===Phenotypes of a mutant ===
Line 82: Line 82:
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P54482 P54482]
 
* '''Swiss prot entry:''' [http://www.uniprot.org/uniprot/P54482 P54482]
  
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU25070 BSU25070]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu+BSU25070]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 13:53, 3 June 2009

  • Description: similar to peptidoglycan acetylation, 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate synthase

Gene name ispG
Synonyms yqfY
Essential yes PubMed
Product unknown
Function unknown
MW, pI 40 kDa, 6.802
Gene length, protein length 1131 bp, 377 aa
Immediate neighbours yqfZ, yqfX
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqfY context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU25070

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate + H2O + protein-disulfide = 2-C-methyl-D-erythritol 2,4-cyclodiphosphate + protein-dithiol (according to Swiss-Prot)
  • Protein family: ispG family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: secreted (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed