Difference between revisions of "Xre"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xkdA]]'', ''[[xkdB]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[xkdA]]'', ''[[xkdB]]''
 
|-
 
|-
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/xre_nucleotide.txt    Gene sequence      (+200bp)  ]'''
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13108&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/xre_protein.txt Protein sequence]'''
 
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:xre_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:xre_context.gif]]

Revision as of 03:40, 17 April 2009

  • Description: transcriptional repressor of PBSX genes

Gene name xre
Synonyms
Essential no
Product transcriptional repressor
Function regulation of PBSX prophage gene expression
MW, pI 13 kDa, 8.448
Gene length, protein length 339 bp, 113 aa
Immediate neighbours xkdA, xkdB
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
Xre context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed