Difference between revisions of "Sandbox"

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|style="background:#ABCDEF;" align="center"|'''Gene name'''
 
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''yyaB''
+
|''yyaJ''
 
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
 
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
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|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 10.415  
+
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 49 kDa, 9.584  
 
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 438 bp, 146 aa  
+
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1353 bp, 451 aa  
 
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[soj]]'', ''[[noc]]''
+
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yyaK]]'', ''[[maa]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
|colspan="2" style="background:#FAF8CC;" align="center"|'''Hier soll was neues rein'''
 
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|-||-
 
|-||-
|colspan="2" | '''Genetic context''' <br/> [[Image:yyaB_context.gif]]
+
|colspan="2" | '''Genetic context''' <br/> [[Image:yyaJ_context.gif]]
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 
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Line 42: Line 42:
 
=== Database entries ===
 
=== Database entries ===
  
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yyaB.html]
+
* '''DBTBS entry:''' no entry
  
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10056]
+
* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10042]
  
 
=== Additional information===
 
=== Additional information===
Line 81: Line 81:
 
* '''Swiss prot entry:'''
 
* '''Swiss prot entry:'''
  
* '''KEGG entry:''' [http://www.genome.jp/dbget|-bin/www_bget?bsu+BSU40980]
+
* '''KEGG entry:''' [http://www.genome.jp/dbget|-bin/www_bget?bsu+BSU40840]
  
 
* '''E.C. number:'''
 
* '''E.C. number:'''

Revision as of 13:27, 15 April 2009

  • Description: unknown

- Gene name yyaJ - Synonyms - Essential no - Product unknown - Function unknown - MW, pI 49 kDa, 9.584 - Gene length, protein length 1353 bp, 451 aa - Immediate neighbours yyaK, maa - Hier soll was neues rein -
Genetic context
YyaJ context.gif
This image was kindly provided by SubtiList
-



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two|-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page|-page. PubMed