Difference between revisions of "RplJ"

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(Expression and regulation)
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
** [[rplJ|L10]]-[[rplL|L12]]<sub>4</sub> complex: transcription termination at excess of the complex (autorepression) {{PubMed|26101249}}
+
** [[rplJ|L10]]-[[rplL|L12]]<sub>4</sub> complex: transcription termination (attenuation) at excess of the complex (autorepression) {{PubMed|26101249}}
  
 
* '''Additional information:'''
 
* '''Additional information:'''

Revision as of 09:25, 23 July 2015

Gene name rplJ
Synonyms
Essential yes PubMed
Product ribosomal protein L10 (BL5)
Function translation
Gene expression levels in SubtiExpress: rplJ
Interactions involving this protein in SubtInteract: RplJ
MW, pI 17 kDa, 5.489
Gene length, protein length 498 bp, 166 aa
Immediate neighbours rplA, rplL
Sequences Protein DNA DNA_with_flanks
Genetic context
RplJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RplJ expression.png















Categories containing this gene/protein

translation, essential genes, most abundant proteins

This gene is a member of the following regulons

stringent response

The gene

Basic information

  • Locus tag: BSU01040

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • RelA dependent downregulation (Class I) during stringent response PubMed
    • termination/ antitermination (L10-L124 complex) PubMed
  • Regulatory mechanism:
    • L10-L124 complex: transcription termination (attenuation) at excess of the complex (autorepression) PubMed
  • Additional information:
    • belongs to the 100 most abundant proteins PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium): 1318 PubMed
    • number of protein molecules per cell (complex medium with amino acids, without glucose): 7379 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, exponential phase): 5113 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, early stationary phase after glucose exhaustion): 2638 PubMed
    • number of protein molecules per cell (minimal medium with glucose and ammonium, late stationary phase after glucose exhaustion): 2690 PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References