Difference between revisions of "YxaC"
| Line 56: | Line 56: | ||
===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| − | ** ''yxaKC'' mutant is delayed in pellicle formation | + | ** ''yxaKC'' mutant is delayed in pellicle formation {{PubMed|26060272}} |
| − | ** ''ywbHG''-''yxaKC''-''ysbAB'' triple mutant is severely delayed in pellicle formation | + | ** ''ywbHG''-''yxaKC''-''ysbAB'' triple mutant is severely delayed in pellicle formation {{PubMed|26060272}} |
=== Database entries === | === Database entries === | ||
| Line 121: | Line 121: | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** ''yxaKC'' expression is induced by acetate | + | ** ''yxaKC'' expression is induced by acetate {{PubMed|26060272}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 146: | Line 146: | ||
=References= | =References= | ||
| − | <pubmed> 10746760 </pubmed> | + | <pubmed> 26060272 10746760 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 14:12, 11 June 2015
- Description: unknown
| Gene name | yxaC |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: yxaC | |
| MW, pI | 25 kDa, 9.118 |
| Gene length, protein length | 690 bp, 230 aa |
| Immediate neighbours | yxzK, yxaB |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
membrane proteins, proteins of unknown function
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU40022
Phenotypes of a mutant
Database entries
- BsubCyc: BSU40022
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cell membrane (according to Swiss-Prot)
Database entries
- BsubCyc: BSU40022
- Structure:
- Swiss prot entry: P42102
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: yxaC PubMed
- Sigma factor:
- Regulation:
- yxaKC expression is induced by acetate PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Yun Chen, Kevin Gozzi, Fang Yan, Yunrong Chai
Acetic Acid Acts as a Volatile Signal To Stimulate Bacterial Biofilm Formation.
mBio: 2015, 6(3);e00392
[PubMed:26060272]
[WorldCat.org]
[DOI]
(I e)
Ken-Ichi Yoshida, Izumi Ishio, Eishi Nagakawa, Yoshiyuki Yamamoto, Mami Yamamoto, Yasutaro Fujita
Systematic study of gene expression and transcription organization in the gntZ-ywaA region of the Bacillus subtilis genome.
Microbiology (Reading): 2000, 146 ( Pt 3);573-579
[PubMed:10746760]
[WorldCat.org]
[DOI]
(P p)
