Difference between revisions of "RghR"

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* '''Description:''' repressor of ''[[rapD]]'', ''[[rapG]]'', ''[[rapH]]'' and ''[[yvaM]]'' <br/><br/>
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* '''Description:''' transcriptional repressor ([[transcription factors of the Xre family|Xre family]]) of ''[[rapD]]'', ''[[rapG]]'', ''[[rapH]]'' and ''[[yvaM]]'' <br/><br/>
  
 
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{| align="right" border="1" cellpadding="2"  
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|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
|style="background:#ABCDEF;" align="center"| '''Essential''' || no  
 
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|-
|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor  
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor ([[transcription factors of the Xre family|Xre family]])
 
|-
 
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of sporulation initiation
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of [[sporulation]] initiation
 
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|-
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33660 rghR]
 
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU33660 rghR]
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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
  
* '''Protein family:'''
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* '''Protein family:''' ([[transcription factors of the Xre family|Xre family]])
  
 
* '''Paralogous protein(s):'''
 
* '''Paralogous protein(s):'''

Revision as of 17:04, 11 June 2014

Gene name rghR
Synonyms yvaN
Essential no
Product transcriptional repressor (Xre family)
Function regulation of sporulation initiation
Gene expression levels in SubtiExpress: rghR
Function and regulation of this protein in SubtiPathways:
rghR
MW, pI 15 kDa, 6.179
Gene length, protein length 405 bp, 135 aa
Immediate neighbours yvzC, yvaO
Sequences Protein DNA DNA_with_flanks
Genetic context
YvaN context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
RghR expression.png















Categories containing this gene/protein

transcription factors and their control, phosphorelay

This gene is a member of the following regulons

The RghR regulon

The gene

Basic information

  • Locus tag: BSU33660

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Mitsuo Ogura, Yasutaro Fujita
Bacillus subtilis rapD, a direct target of transcription repression by RghR, negatively regulates srfA expression.
FEMS Microbiol Lett: 2007, 268(1);73-80
[PubMed:17227471] [WorldCat.org] [DOI] (P p)

Kentaro Hayashi, Tsukahara Kensuke, Kazuo Kobayashi, Naotake Ogasawara, Mitsuo Ogura
Bacillus subtilis RghR (YvaN) represses rapG and rapH, which encode inhibitors of expression of the srfA operon.
Mol Microbiol: 2006, 59(6);1714-29
[PubMed:16553878] [WorldCat.org] [DOI] (P p)