Difference between revisions of "LdcB"

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* '''Description:''' LD-carboxypeptidase <br/><br/>
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* '''Description:''' LD-carboxypeptidase, releases D-Ala from the cell wall <br/><br/>
  
 
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* '''Catalyzed reaction/ biological activity:'''  
 
* '''Catalyzed reaction/ biological activity:'''  
** trimming of cell wall peptides (tetrapeptides to tripeptides) {{PubMed|24909784}}
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** trimming of cell wall peptides (tetrapeptides to tripeptides) wit concomitant release of D-ala {{PubMed|24909784}}
  
 
* '''Protein family:'''
 
* '''Protein family:'''

Revision as of 08:03, 10 June 2014

  • Description: LD-carboxypeptidase, releases D-Ala from the cell wall

Gene name ldcB
Synonyms yodJ
Essential no
Product LD-carboxypeptidase
Function cell wall synthesis
Gene expression levels in SubtiExpress: ldcB
MW, pI 30 kDa, 5.84
Gene length, protein length 819 bp, 273 aa
Immediate neighbours yodI, deoD
Sequences Protein DNA DNA_with_flanks
Genetic context
YodJ context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YodJ expression.png















Categories containing this gene/protein

cell wall synthesis

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU19620

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
    • trimming of cell wall peptides (tetrapeptides to tripeptides) wit concomitant release of D-ala PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References