Difference between revisions of "AraR"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33970&redirect=T BSU33970]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/araR.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/araR.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU33970&redirect=T BSU33970]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3TB6 3TB6] (effector-binding domain) {{PubMed|22281747}}
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3TB6 3TB6] (effector-binding domain) {{PubMed|22281747}}

Revision as of 14:47, 2 April 2014

  • Description: repressor of the arabinose utilization genes

Gene name araR
Synonyms araC, yvbS
Essential no
Product transcriptional repressor (GntR family, LacI family)
Function regulation of arabinose utilization

(araABDLMNPQ-abfA) and of the araE/araR genes

Gene expression levels in SubtiExpress: araR

(araABDLMNPQ-abfA) and of the araE/araR genes

MW, pI 43 kDa, 6.341
Gene length, protein length 1152 bp, 384 aa
Immediate neighbours araE, yvbT
Sequences Protein DNA DNA_with_flanks
Genetic context
AraR context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AraR expression.png















Categories containing this gene/protein

utilization of specific carbon sources, transcription factors and their control

This gene is a member of the following regulons

AraR regulon

The AraR regulon

The gene

Basic information

  • Locus tag: BSU33970

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed