Difference between revisions of "PapB"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13860&redirect=T BSU13860] | ||
* '''DBTBS entry:''' no entry | * '''DBTBS entry:''' no entry | ||
| Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU13860&redirect=T BSU13860] | ||
* '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3Q6D 3Q6D] (''B. anthracis'' Xaa-Pro dipeptidase, 35% identity, 55% similarity) | * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?structureId=3Q6D 3Q6D] (''B. anthracis'' Xaa-Pro dipeptidase, 35% identity, 55% similarity) | ||
Revision as of 13:33, 2 April 2014
- Description: Xaa-Pro amino-peptidase
| Gene name | papB |
| Synonyms | ykvY |
| Essential | no |
| Product | Xaa-Pro amino-peptidase |
| Function | degradation of proline-containing peptides |
| Gene expression levels in SubtiExpress: papB | |
| Metabolic function and regulation of this protein in SubtiPathways: papB | |
| MW, pI | 40 kDa, 5.171 |
| Gene length, protein length | 1089 bp, 363 aa |
| Immediate neighbours | zosA, ykvZ |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
utilization of nitrogen sources other than amino acids, coping with hyper-osmotic stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU13860
Phenotypes of a mutant
Database entries
- BsubCyc: BSU13860
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: peptidase M24B family (according to Swiss-Prot)
- Paralogous protein(s): PapA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU13860
- Structure: 3Q6D (B. anthracis Xaa-Pro dipeptidase, 35% identity, 55% similarity)
- UniProt: O31689
- KEGG entry: [2]
- E.C. number: 3.4.11.9
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
