Difference between revisions of "YcnE"
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=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03870&redirect=T BSU03870] | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ycnED.html] | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ycnED.html] | ||
| Line 92: | Line 93: | ||
=== Database entries === | === Database entries === | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU03870&redirect=T BSU03870] | ||
* '''Structure:''' | * '''Structure:''' | ||
Revision as of 12:59, 2 April 2014
- Description: unknown
| Gene name | ycnE |
| Synonyms | |
| Essential | no |
| Product | unknown |
| Function | unknown |
| Gene expression levels in SubtiExpress: ycnE | |
| MW, pI | 10 kDa, 4.866 |
| Gene length, protein length | 285 bp, 95 aa |
| Immediate neighbours | ycnD, yczG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
phosphoproteins, proteins of unknown function
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU03870
Phenotypes of a mutant
Database entries
- BsubCyc: BSU03870
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
- The E.coli homolog: lsrG
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: lsrG family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification: phosphorylation on Ser-24 PubMed
- Cofactor(s):
- Effectors of protein activity:
Database entries
- BsubCyc: BSU03870
- Structure:
- UniProt: P94425
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- induced by chromanon PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Van Duy Nguyen, Carmen Wolf, Ulrike Mäder, Michael Lalk, Peter Langer, Ulrike Lindequist, Michael Hecker, Haike Antelmann
Transcriptome and proteome analyses in response to 2-methylhydroquinone and 6-brom-2-vinyl-chroman-4-on reveal different degradation systems involved in the catabolism of aromatic compounds in Bacillus subtilis.
Proteomics: 2007, 7(9);1391-408
[PubMed:17407181]
[WorldCat.org]
[DOI]
(P p)
Boris Macek, Ivan Mijakovic, Jesper V Olsen, Florian Gnad, Chanchal Kumar, Peter R Jensen, Matthias Mann
The serine/threonine/tyrosine phosphoproteome of the model bacterium Bacillus subtilis.
Mol Cell Proteomics: 2007, 6(4);697-707
[PubMed:17218307]
[WorldCat.org]
[DOI]
(P p)
