Difference between revisions of "PheT"

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= [[Categories]] containing this gene/protein =
 
= [[Categories]] containing this gene/protein =
 
{{SubtiWiki category|[[translation]]}},
 
{{SubtiWiki category|[[translation]]}},
{{SubtiWiki category|[[essential genes]]}}
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{{SubtiWiki category|[[essential genes]]}},
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[[most abundant proteins]]
  
 
= This gene is a member of the following [[regulons]] =
 
= This gene is a member of the following [[regulons]] =
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=== Additional information===
 
=== Additional information===
 
 
 
  
 
=The protein=
 
=The protein=
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* '''Kinetic information:'''
 
* '''Kinetic information:'''
  
* '''Domains:'''  
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* '''[[Domains]]:'''  
  
 
* '''Modification:'''
 
* '''Modification:'''
  
* '''Cofactor(s):'''
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* '''[[Cofactors]]:'''
  
 
* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pheT_2927008_2929422_-1 pheT] {{PubMed|22383849}}
 
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=pheT_2927008_2929422_-1 pheT] {{PubMed|22383849}}
  
* '''Sigma factor:''' [[SigA]] {{PubMed|2127701}}
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* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|2127701}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
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* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
 
** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}}
 
** [[T-box]]: [[RNA switch]], transcriptional antitermination {{PubMed|19258532}}
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* '''Additional information:'''
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** belongs to the 100 [[most abundant proteins]] {{PubMed|15378759}}
  
 
=Biological materials =
 
=Biological materials =
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=References=
 
=References=
  
<pubmed>19258532,2127701, </pubmed>
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<pubmed>19258532,2127701,15378759</pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 16:52, 5 March 2014

  • Description: phenylalanyl-tRNA synthetase (beta subunit)

Gene name pheT
Synonyms
Essential yes PubMed
Product phenylalanyl-tRNA synthetase (beta subunit)
Function translation
Gene expression levels in SubtiExpress: pheT
Interactions involving this protein in SubtInteract: PheT
Metabolic function and regulation of this protein in SubtiPathways:
pheT
MW, pI 87 kDa, 4.864
Gene length, protein length 2412 bp, 804 aa
Immediate neighbours rnhC, pheS
Sequences Protein DNA DNA_with_flanks
Genetic context
PheT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
PheT expression.png















Categories containing this gene/protein

translation, essential genes, most abundant proteins

This gene is a member of the following regulons

T-box

The gene

Basic information

  • Locus tag: BSU28630

Phenotypes of a mutant

essential PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: ATP + L-phenylalanine + tRNA(Phe) = AMP + diphosphate + L-phenylalanyl-tRNA(Phe) (according to Swiss-Prot)
  • Protein family: Type 1 subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Modification:
  • Effectors of protein activity:

Database entries

  • Structure: 1PYS (from Thermus thermophilus hb8 mutant, 37% identity, 56% similarity) PubMed
  • KEGG entry: [3]

Additional information

Expression and regulation

  • Regulation:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References